contig_metadata
10 rows where bioproject = "PRJNA657343", tax_kingdom = "Bacillati" and tax_phylum = "Mycoplasmatota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3712146 | 3712146 | PRJNA657343_P_NODE_42243_length_163_cov_3.368421_g42219_i0 | PRJNA657343 | 42243 | 163 | 3.368421 | 5.49052623 | Mesomycoplasma | 2923352 | Bacteria | Bacteria | 294 | 2.04e-75 | NTclustered | gi|1958638472|gb|MW498281.1| | 2100 | g42219 | i0 | 100 | 97.1533742331288 | 159 | 0 | 98 | 0 | 1 | 159 | 2177 | 2335 | Mesomycoplasma hyorhinis strain MycSu21 23S ribosomal RNA gene, partial sequence | blastn | 15836 | 294 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Mesomycoplasma | Mesomycoplasma hyorhinis | |||
| 7538323 | 7538323 | PRJNA657343_P_NODE_6486_length_314_cov_4.901887_g6462_i0 | PRJNA657343 | 6486 | 314 | 4.901887 | 15.39192518 | Mycoplasma | 2093 | Bacteria | Bacteria | 512 | 1.12e-140 | NTclustered | gi|2294785939|gb|CP103424.1| | 51364 | g6462 | i0 | 99.293 | 179.050955414013 | 283 | 2 | 90 | 0 | 32 | 314 | 271978 | 271696 | Mycoplasma cottewii strain VIS chromosome, complete genome | blastn | 56222 | 512 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma cottewii | ||
| 10089023 | 10089023 | PRJNA657343_P_NODE_47228_length_153_cov_2.951923_g47204_i0 | PRJNA657343 | 47228 | 153 | 2.951923 | 4.51644219 | Metamycoplasmataceae | 2895623 | Bacteria | Bacteria | 276 | 6.83e-70 | NTclustered | gi|23451293|gb|AF422142.1| | 2115 | g47204 | i0 | 100 | 187.535947712418 | 149 | 0 | 97 | 0 | 2 | 150 | 449 | 597 | Mycoplasma fermentans 23S ribosomal RNA gene, domains IV and V, partial sequence | blastn | 28693 | 276 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Mycoplasmopsis | Mycoplasmopsis fermentans | |||
| 15188919 | 15188919 | PRJNA657343_P_NODE_19432_length_209_cov_5.537500_g19408_i0 | PRJNA657343 | 19432 | 209 | 5.5375 | 11.573375 | Mycoplasma | 2093 | Bacteria | Bacteria | 368 | 1.5999999999999996e-97 | NTclustered | gi|54609775|gb|AY765214.1| | 51364 | g19408 | i0 | 99.024 | 182.44019138756 | 205 | 2 | 98 | 0 | 3 | 207 | 442 | 646 | Mycoplasma cottewii strain ATCC 43093 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 38130 | 368 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma cottewii | ||
| 16463183 | 16463183 | PRJNA657343_P_NODE_19953_length_207_cov_5.753165_g19929_i0 | PRJNA657343 | 19953 | 207 | 5.753165 | 11.90905155 | Mollicutes | 31969 | Bacteria | Bacteria | 372 | 1.2199999999999997e-98 | NTclustered | gi|1958638505|gb|MW498314.1| | 2100 | g19929 | i0 | 99.51 | 98.5507246376812 | 204 | 1 | 99 | 0 | 4 | 207 | 2673 | 2876 | Mesomycoplasma hyorhinis strain MycSu128 23S ribosomal RNA gene, partial sequence | blastn | 20400 | 372 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Mesomycoplasma | Mesomycoplasma hyorhinis | |||
| 16463185 | 16463185 | PRJNA657343_P_NODE_21473_length_202_cov_1.326797_g21449_i0 | PRJNA657343 | 21473 | 202 | 1.326797 | 2.68012994 | Metamycoplasmataceae | 2895623 | Bacteria | Bacteria | 364 | 1.99e-96 | NTclustered | gi|507148354|ref|NR_103157.1| | 2115 | g21449 | i0 | 99.5 | 169.727722772277 | 200 | 1 | 99 | 0 | 2 | 201 | 81 | 280 | Mycoplasma fermentans strain JER 23S ribosomal RNA gene, complete sequence | blastn | 34285 | 364 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Mycoplasmopsis | Mycoplasmopsis fermentans | |||
| 16463211 | 16463211 | PRJNA657343_P_NODE_45613_length_159_cov_2.227273_g45589_i0 | PRJNA657343 | 45613 | 159 | 2.227273 | 3.54136407 | Mycoplasma | 2093 | Bacteria | Bacteria | 274 | 2.58e-69 | NTclustered | gi|54609775|gb|AY765214.1| | 51364 | g45589 | i0 | 98.089 | 182.396226415094 | 157 | 3 | 99 | 0 | 3 | 159 | 853 | 697 | Mycoplasma cottewii strain ATCC 43093 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 29001 | 276 | 0.992753623188406 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma cottewii | ||
| 21562378 | 21562378 | PRJNA657343_P_NODE_11557_length_254_cov_2.643902_g11533_i0 | PRJNA657343 | 11557 | 254 | 2.643902 | 6.71551108 | Mollicutes | 31969 | Bacteria | Bacteria | 448 | 2.5199999999999996e-121 | NTclustered | gi|281186773|gb|GU227378.1| | 2100 | g11533 | i0 | 99.194 | 101.354330708661 | 248 | 2 | 98 | 0 | 4 | 251 | 1112 | 1359 | Mycoplasma hyorhinis strain USP36P 16S ribosomal RNA gene, partial sequence | blastn | 25744 | 448 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Mesomycoplasma | Mesomycoplasma hyorhinis | |||
| 22837841 | 22837841 | PRJNA657343_P_NODE_4678_length_354_cov_7.888525_g4655_i0 | PRJNA657343 | 4678 | 354 | 7.888525 | 27.9253785 | Mycoplasma | 2093 | Bacteria | Bacteria | 643 | 4.3399999999999985e-180 | NTclustered | gi|2294785939|gb|CP103424.1| | 51364 | g4655 | i0 | 100 | 190.71186440678 | 348 | 0 | 98 | 0 | 7 | 354 | 270206 | 269859 | Mycoplasma cottewii strain VIS chromosome, complete genome | blastn | 67512 | 643 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma cottewii | ||
| 22837844 | 22837844 | PRJNA657343_P_NODE_8618_length_283_cov_8.914530_g8594_i0 | PRJNA657343 | 8618 | 283 | 8.91453 | 25.2281199 | Mollicutes | 31969 | Bacteria | Bacteria | 494 | 3.61e-135 | NTclustered | gi|281186802|gb|GU227407.1| | 2099 | g8594 | i0 | 99.63 | 95.4204946996466 | 270 | 1 | 95 | 0 | 11 | 280 | 757 | 488 | Mycoplasma hyopneumoniae strain USP14P 16S ribosomal RNA gene, partial sequence | blastn | 27004 | 494 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Mesomycoplasma | Mesomycoplasma hyopneumoniae |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;