contig_metadata
5 rows where bioproject = "PRJNA657343", tax_clade = "PVC group" and tax_phylum = "Chlamydiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4450721 | 4450721 | PRJNA657343_P_NODE_15824_length_226_cov_3.333333_g15800_i0 | PRJNA657343 | 15824 | 226 | 3.333333 | 7.53333258 | Simkania sp. | 34094 | Bacteria | Bacteria | 127 | 1.99e-35 | NR | MCB1084350.1 | 34094 | g15800 | i0 | 80 | 1.85840707964602 | 70 | 14 | 92.9 | 0 | 2 | 211 | 27 | 96 | MCB1084350.1 MC/SLC25 family protein [Simkania sp.] | diamond | 420 | 127 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Simkaniaceae | Simkania | Simkania sp. | |
| 7001653 | 7001653 | PRJNA657343_P_NODE_3126_length_414_cov_3.106849_g3103_i0 | PRJNA657343 | 3126 | 414 | 3.106849 | 12.86235486 | Simkania sp. | 34094 | Bacteria | Bacteria | 209 | 1.42e-65 | NR | MCB1084310.1 | 34094 | g3103 | i0 | 75.4 | 0.971014492753623 | 134 | 33 | 97.1 | 0 | 6 | 407 | 51 | 184 | MCB1084310.1 hypothetical protein [Simkania sp.] | diamond | 402 | 209 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Simkaniaceae | Simkania | Simkania sp. | |
| 9552485 | 9552485 | PRJNA657343_S_NODE_25028_length_179_cov_1.823077_g25003_i0 | PRJNA657343 | 25028 | 179 | 1.823077 | 3.26330783 | uncultured Parachlamydiaceae bacterium | 464461 | Bacteria | Bacteria | 211 | 2.36e-50 | NTclustered | gi|2874253811|emb|OY969795.1| | 464461 | g25003 | i0 | 88.268 | 120.441340782123 | 179 | 17 | 99 | 4 | 2 | 178 | 655212 | 655388 | MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1 | blastn | 21559 | 211 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | uncultured Parachlamydiaceae bacterium | ||
| 31377075 | 31377075 | PRJNA657343_P_NODE_12976_length_243_cov_5.500000_g12952_i0 | PRJNA657343 | 12976 | 243 | 5.5 | 13.365 | Chlamydiales bacterium | 2047757 | Bacteria | Bacteria | 102 | 1.05e-25 | NR | MCP5470420.1 | 2047757 | g12952 | i0 | 80 | 0.740740740740741 | 60 | 12 | 74.1 | 0 | 241 | 62 | 20 | 79 | MCP5470420.1 ribosomal protein L24e family protein [Chlamydiales bacterium] | diamond | 180 | 102 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiales bacterium | |||
| 31819650 | 31819650 | PRJNA657343_P_NODE_13217_length_242_cov_1.113990_g13193_i0 | PRJNA657343 | 13217 | 242 | 1.11399 | 2.6958558 | Simkania sp. | 34094 | Bacteria | Bacteria | 44.7 | 0.00667 | NR | MCB1084310.1 | 34094 | g13193 | i0 | 55.6 | 0.446280991735537 | 36 | 16 | 44.6 | 0 | 2 | 109 | 161 | 196 | MCB1084310.1 hypothetical protein [Simkania sp.] | diamond | 108 | 44.7 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Simkaniaceae | Simkania | Simkania sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;