RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA656952" and tax_kingdom = "Shotokuvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Shotokuvirae · 2 ✖

bioproject 1

  • PRJNA656952 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27776472 27776472 PRJNA656952_P_NODE_38444_length_245_cov_0.895349_g38257_i0 PRJNA656952 38444 245 0.895349 2.19360505 Circoviridae sp. 1954248 Viruses Viruses 53.9 2.9e-6   NR AXH73276.1 1954248 g38257 i0 31.5 1.78775510204082 73 50 89.4 0 240 22 162 234 AXH73276.1 MAG: putative capsid protein [Circoviridae sp.] diamond 438 53.9 1 Viruses   Shotokuvirae Cressdnaviricota Arfiviricetes Rohanvirales Nenyaviridae Galvornvirus Galvornvirus isengard
28912714 28912714 PRJNA656952_P_NODE_5188_length_500_cov_0.918033_g5001_i0 PRJNA656952 5188 500 0.918033 4.590165 Circoviridae sp. 1954248 Viruses Viruses 104 6.3599999999999996e-24   NR AYP28888.1 1954248 g5001 i0 50 0.624 104 51 62.4 1 2 313 166 268 AYP28888.1 MAG: helicase [Circoviridae sp.] diamond 312 104 1 Viruses   Shotokuvirae Cressdnaviricota Arfiviricetes Rohanvirales Nenyaviridae Galvornvirus Galvornvirus isengard

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;