RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA656952", tax_clade = "Opisthokonta" and tax_phylum = "Mollusca"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 7 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 7 ✖

bioproject 1

  • PRJNA656952 · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
622142 622142 PRJNA656952_P_NODE_23021_length_287_cov_1.439252_g22834_i0 PRJNA656952 23021 287 1.439252 4.13065324 Bradybaena similaris 145626 Mollusca Mollusca 63.9 1.23e-5   NTclustered gi|2912998575|dbj|AP039604.1| 145626 g22834 i0 93.182 1.72473867595819 44 2 15 1 41 84 11262065 11262107 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 23, sequence blastn 495 63.9 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
1159807 1159807 PRJNA656952_P_NODE_14041_length_348_cov_0.836364_g13854_i0 PRJNA656952 14041 348 0.836364 2.91054672 Metazoa 33208 Mollusca Mollusca 643 4.279999999999998e-180   NTclustered gi|1928112764|gb|MT947788.1| 6523 g13854 i0 100 99.4252873563218 348 0 100 0 1 348 1433 1086 Lymnaea stagnalis isolate Lsta_434075 hypothetical protein mRNA, complete cds blastn 34600 643 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Lymnaeidae Lymnaea Lymnaea stagnalis
21561997 21561997 PRJNA656952_P_NODE_22817_length_288_cov_1.432558_g22630_i0 PRJNA656952 22817 288 1.432558 4.12576704 Metazoa 33208 Mollusca Mollusca 527 3.63e-145   NTclustered gi|1928112764|gb|MT947788.1| 6523 g22630 i0 99.653 99.9861111111111 288 1 100 0 1 288 288 575 Lymnaea stagnalis isolate Lsta_434075 hypothetical protein mRNA, complete cds blastn 28796 532 0.990601503759398 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Lymnaeidae Lymnaea Lymnaea stagnalis
22299866 22299866 PRJNA656952_P_NODE_43778_length_241_cov_0.916667_g43591_i0 PRJNA656952 43778 241 0.916667 2.20916747 Bradybaena similaris 145626 Mollusca Mollusca 167 7.429999999999999e-37   NTclustered gi|2912990805|dbj|AP039595.1| 145626 g43591 i0 92.982 1.0954356846473 114 8 47 0 1 114 46275642 46275755 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 14, sequence blastn 264 167 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
23575120 23575120 PRJNA656952_P_NODE_36459_length_247_cov_0.885057_g36272_i0 PRJNA656952 36459 247 0.885057 2.18609079 Bradybaena similaris 145626 Mollusca Mollusca 52.8 0.022   NTclustered gi|2912994531|dbj|AP039599.1| 145626 g36272 i0 100 0.11336032388664 28 0 11 0 5 32 5800266 5800239 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 18, sequence blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
27902397 27902397 PRJNA656952_P_NODE_31925_length_251_cov_0.865169_g31738_i0 PRJNA656952 31925 251 0.865169 2.17157419 Haliotis asinina 109174 Mollusca Mollusca 73.9 2.68e-14   NR XP_067677332.1 109174 g31738 i0 63.6 1.31474103585657 55 20 65.7 0 1 165 47 101 XP_067677332.1 2-iminobutanoate/2-iminopropanoate deaminase-like [Haliotis asinina] diamond 330 73.9 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis asinina
28483198 28483198 PRJNA656952_P_NODE_37266_length_246_cov_0.890173_g37079_i0 PRJNA656952 37266 246 0.890173 2.18982558 Metazoa 33208 Mollusca Mollusca 87.8 5.06e-18   NR XP_052788576.1 6604 g37079 i0 48.2 4.04878048780488 83 40 98.8 2 2 244 221 302 XP_052788576.1 glutaminase kidney isoform, mitochondrial-like [Mya arenaria] diamond 996 87.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Myidae Mya Mya arenaria

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;