RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA656952", tax_clade = "Opisthokonta" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA656952 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30093371 30093371 PRJNA656952_P_NODE_20372_length_302_cov_1.340611_g20185_i0 PRJNA656952 20372 302 1.340611 4.04864522 Metazoa 33208 Echinodermata other_Eukaryota 55.1 3.32e-6   NR XP_038064703.1 46514 g20185 i0 45.8 2.83112582781457 59 26 57.6 2 175 2 246 299 XP_038064703.1 putative cyclin-dependent serine/threonine-protein kinase DDB_G0272797/DDB_G0274007, partial [Patiria miniata] diamond 855 55.1 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata
32862407 32862407 PRJNA656952_P_NODE_44040_length_241_cov_0.916667_g43853_i0 PRJNA656952 44040 241 0.916667 2.20916747 Holothuria leucospilota 206669 Echinodermata other_Eukaryota 73.6 1.41e-14   NR KAJ8034103.1 206669 g43853 i0 63.5 8.45228215767635 52 19 64.7 0 24 179 73 124 KAJ8034103.1 hypothetical protein HOLleu_24533 [Holothuria leucospilota] diamond 2037 73.6 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Holothuriidae Holothuria Holothuria leucospilota

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;