RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA656952", tax_clade = "Opisthokonta" and tax_phylum = "Cnidaria"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 3 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 3 ✖

bioproject 1

  • PRJNA656952 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17200198 17200198 PRJNA656952_P_NODE_25874_length_274_cov_1.532338_g25687_i0 PRJNA656952 25874 274 1.532338 4.19860612 Rhopilema esculentum 499914 Cnidaria other_Eukaryota 71.3 6.95e-8   NTclustered gi|2729091866|ref|XM_065208647.1| 499914 g25687 i0 82.353 0.31021897810219 85 12 30 1 144 225 1 85 PREDICTED: Rhopilema esculentum histone H2B, gonadal-like (LOC135690949), mRNA blastn 85 71.3 1 Eukaryota Opisthokonta Metazoa Cnidaria Scyphozoa Rhizostomeae Rhizostomatidae Rhopilema Rhopilema esculentum
19749607 19749607 PRJNA656952_P_NODE_6516_length_460_cov_1.020672_g6329_i0 PRJNA656952 6516 460 1.020672 4.6950912 Metazoa 33208 Cnidaria other_Eukaryota 321 5.3999999999999986e-108   NR XP_065663188.1 6087 g6329 i0 96.7 266.660869565217 152 5 99.1 0 3 458 34 185 XP_065663188.1 serine/threonine-protein phosphatase alpha-2 isoform [Hydra vulgaris] diamond 122664 323 0.993808049535604 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris
27808096 27808096 PRJNA656952_P_NODE_43484_length_241_cov_0.916667_g43297_i0 PRJNA656952 43484 241 0.916667 2.20916747 Rhopilema esculentum 499914 Cnidaria other_Eukaryota 68.6 2.9e-11   NR XP_065064159.1 499914 g43297 i0 67.5 0.49792531120332 40 13 49.8 0 17 136 215 254 XP_065064159.1 lipid scramblase CLPTM1L-like [Rhopilema esculentum] diamond 120 68.6 1 Eukaryota Opisthokonta Metazoa Cnidaria Scyphozoa Rhizostomeae Rhizostomatidae Rhopilema Rhopilema esculentum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;