contig_metadata
59 rows where bioproject = "PRJNA645397" and tax_phylum = "Chordata"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 619581 | 619581 | PRJNA645397_P_NODE_10941_length_162_cov_1.141593_g10868_i0 | PRJNA645397 | 10941 | 162 | 1.141593 | 1.84938066 | Mus musculus | 10090 | Chordata | Chordata | 241 | 2.68e-59 | NTclustered | gi|27597053|gb|AC115356.5| | 10090 | g10868 | i0 | 99.248 | 1.64197530864198 | 133 | 1 | 82 | 0 | 30 | 162 | 158761 | 158629 | Mus musculus BAC clone RP23-47E9 from 15, complete sequence | blastn | 266 | 241 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 619583 | 619583 | PRJNA645397_P_NODE_11181_length_159_cov_2.090909_g11108_i0 | PRJNA645397 | 11181 | 159 | 2.090909 | 3.32454531 | Mus musculus | 10090 | Chordata | Chordata | 254 | 3.36e-63 | NTclustered | gi|354797290|gb|JN961791.1| | 10090 | g11108 | i0 | 99.286 | 13.8176100628931 | 140 | 1 | 88 | 0 | 20 | 159 | 885 | 746 | Mus musculus targeted non-conditional, lacZ-tagged mutant allele Prss41:tm1e(KOMP)Wtsi; transgenic | blastn | 2197 | 254 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 619584 | 619584 | PRJNA645397_P_NODE_1681_length_402_cov_1.254958_g1612_i0 | PRJNA645397 | 1681 | 402 | 1.254958 | 5.04493116 | Mus musculus | 10090 | Chordata | Chordata | 702 | 0 | NTclustered | gi|56178031|gb|AC101727.8| | 10090 | g1612 | i0 | 100 | 0.945273631840796 | 380 | 0 | 95 | 0 | 23 | 402 | 186449 | 186070 | Mus musculus chromosome 1, clone RP23-327G3, complete sequence | blastn | 380 | 702 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 619586 | 619586 | PRJNA645397_P_NODE_2381_length_348_cov_2.963211_g2308_i0 | PRJNA645397 | 2381 | 348 | 2.963211 | 10.31197428 | Xenopus laevis | 8355 | Chordata | Chordata | 374 | 6.189999999999998e-99 | NTclustered | gi|56474874|gb|AY726636.1| | 8355 | g2308 | i0 | 99.043 | 15.9683908045977 | 209 | 1 | 60 | 1 | 26 | 233 | 4694 | 4902 | Xenopus laevis Brg1 mRNA, complete cds | blastn | 5557 | 374 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Amphibia | Anura | Pipidae | Xenopus | Xenopus laevis | |
| 619594 | 619594 | PRJNA645397_P_NODE_6921_length_196_cov_1.319728_g6848_i0 | PRJNA645397 | 6921 | 196 | 1.319728 | 2.58666688 | Mus musculus | 10090 | Chordata | Chordata | 311 | 2.53e-80 | NTclustered | gi|21614678|emb|AL731827.6| | 10090 | g6848 | i0 | 98.315 | 1.05102040816327 | 178 | 2 | 90 | 1 | 1 | 177 | 34121 | 34298 | Mouse DNA sequence from clone RP23-109M24 on chromosome 11, complete sequence | blastn | 206 | 311 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 619605 | 619605 | PRJNA645397_S_NODE_1261_length_172_cov_1.869919_g1259_i0 | PRJNA645397 | 1261 | 172 | 1.869919 | 3.21626068 | Xenopus laevis | 8355 | Chordata | Chordata | 276 | 7.860000000000001e-70 | NTclustered | gi|56474874|gb|AY726636.1| | 8355 | g1259 | i0 | 98.71 | 1.96511627906977 | 155 | 2 | 90 | 0 | 18 | 172 | 2021 | 2175 | Xenopus laevis Brg1 mRNA, complete cds | blastn | 338 | 276 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Amphibia | Anura | Pipidae | Xenopus | Xenopus laevis | |
| 619607 | 619607 | PRJNA645397_S_NODE_241_length_313_cov_2.511364_g239_i0 | PRJNA645397 | 241 | 313 | 2.511364 | 7.86056932 | Xenopus laevis | 8355 | Chordata | Chordata | 556 | 5.09e-154 | NTclustered | gi|56474874|gb|AY726636.1| | 8355 | g239 | i0 | 98.722 | 95.5399361022364 | 313 | 4 | 100 | 0 | 1 | 313 | 2488 | 2176 | Xenopus laevis Brg1 mRNA, complete cds | blastn | 29904 | 556 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Amphibia | Anura | Pipidae | Xenopus | Xenopus laevis | |
| 1895774 | 1895774 | PRJNA645397_P_NODE_2602_length_335_cov_1.863636_g2529_i0 | PRJNA645397 | 2602 | 335 | 1.863636 | 6.2431806 | Mus musculus | 10090 | Chordata | Chordata | 551 | 2.559999999999999e-152 | NTclustered | gi|51948678|gb|AC131980.9| | 10090 | g2529 | i0 | 98.403 | 0.934328358208955 | 313 | 5 | 93 | 0 | 23 | 335 | 189106 | 188794 | Mus musculus chromosome 1, clone RP24-170O7, complete sequence | blastn | 313 | 551 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 3170398 | 3170398 | PRJNA645397_P_NODE_7783_length_185_cov_1.602941_g7710_i0 | PRJNA645397 | 7783 | 185 | 1.602941 | 2.96544085 | Rattus norvegicus | 10116 | Chordata | Chordata | 313 | 6.56e-81 | NTclustered | gi|2678926097|ref|XR_010060925.1| | 10116 | g7710 | i0 | 99.419 | 2.8 | 172 | 1 | 93 | 0 | 1 | 172 | 18051 | 17880 | PREDICTED: Rattus norvegicus uncharacterized LOC120098847 (LOC120098847), transcript variant X2, ncRNA | blastn | 518 | 313 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 3170399 | 3170399 | PRJNA645397_P_NODE_7823_length_185_cov_0.948529_g7750_i0 | PRJNA645397 | 7823 | 185 | 0.948529 | 1.75477865 | Suricata suricatta | 37032 | Chordata | Chordata | 104 | 4.3e-18 | NTclustered | gi|1702008658|ref|XM_029927571.1| | 37032 | g7750 | i0 | 84.762 | 11.2162162162162 | 105 | 14 | 57 | 2 | 44 | 148 | 4128 | 4026 | PREDICTED: Suricata suricatta CRK proto-oncogene, adaptor protein (CRK), transcript variant X1, mRNA | blastn | 2075 | 104 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Carnivora | Herpestidae | Suricata | Suricata suricatta | |
| 3170411 | 3170411 | PRJNA645397_P_NODE_9283_length_169_cov_0.866667_g9210_i0 | PRJNA645397 | 9283 | 169 | 0.866667 | 1.46466723 | Rattus norvegicus | 10116 | Chordata | Chordata | 167 | 4.83e-37 | NTclustered | gi|289666911|gb|AC108354.5| | 10116 | g9210 | i0 | 92.982 | 87.1715976331361 | 114 | 8 | 67 | 0 | 33 | 146 | 167751 | 167638 | Rattus norvegicus BAC CH230-45F12 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence | blastn | 14732 | 167 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 3170412 | 3170412 | PRJNA645397_P_NODE_9303_length_169_cov_0.866667_g9230_i0 | PRJNA645397 | 9303 | 169 | 0.866667 | 1.46466723 | Rattus norvegicus | 10116 | Chordata | Chordata | 119 | 1.37e-22 | NTclustered | gi|2678905217|ref|XR_010058652.1| | 10116 | g9230 | i0 | 98.507 | 1.35502958579882 | 67 | 1 | 40 | 0 | 1 | 67 | 67 | 1 | PREDICTED: Rattus norvegicus uncharacterized LOC134482482 (LOC134482482), ncRNA | blastn | 229 | 119 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 5723068 | 5723068 | PRJNA645397_P_NODE_3345_length_296_cov_0.951417_g3272_i0 | PRJNA645397 | 3345 | 296 | 0.951417 | 2.81619432 | Mus musculus | 10090 | Chordata | Chordata | 468 | 2.2999999999999998e-127 | NTclustered | gi|22539260|gb|AC121958.3| | 10090 | g3272 | i0 | 98.855 | 0.885135135135135 | 262 | 3 | 89 | 0 | 1 | 262 | 117990 | 117729 | Mus musculus BAC clone RP24-241I3 from 15, complete sequence | blastn | 262 | 468 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 5723070 | 5723070 | PRJNA645397_P_NODE_5285_length_228_cov_1.536313_g5212_i0 | PRJNA645397 | 5285 | 228 | 1.536313 | 3.50279364 | Mus musculus | 10090 | Chordata | Chordata | 399 | 6.299999999999999e-107 | NTclustered | gi|34610348|gb|AC138739.8| | 10090 | g5212 | i0 | 98.246 | 1 | 228 | 4 | 100 | 0 | 1 | 228 | 20919 | 21146 | Mus musculus chromosome 9, clone RP23-380A10, complete sequence | blastn | 228 | 399 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 6998186 | 6998186 | PRJNA645397_P_NODE_10906_length_162_cov_1.584071_g10833_i0 | PRJNA645397 | 10906 | 162 | 1.584071 | 2.56619502 | Mus musculus | 10090 | Chordata | Chordata | 254 | 3.44e-63 | NTclustered | gi|56461780|gb|AC153383.1| | 10090 | g10833 | i0 | 100 | 2.90740740740741 | 137 | 0 | 85 | 0 | 26 | 162 | 176869 | 177005 | Mus musculus 6 BAC RP23-168L2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence | blastn | 471 | 254 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 6998188 | 6998188 | PRJNA645397_P_NODE_3206_length_302_cov_0.885375_g3133_i0 | PRJNA645397 | 3206 | 302 | 0.885375 | 2.6738325 | Mus musculus | 10090 | Chordata | Chordata | 553 | 6.32e-153 | NTclustered | gi|68300447|gb|AC162390.6| | 10090 | g3133 | i0 | 99.669 | 2 | 302 | 1 | 100 | 0 | 1 | 302 | 227971 | 227670 | Mus musculus 6 BAC RP23-233J7 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence | blastn | 604 | 553 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 6998205 | 6998205 | PRJNA645397_P_NODE_8926_length_171_cov_1.262295_g8853_i0 | PRJNA645397 | 8926 | 171 | 1.262295 | 2.15852445 | Mus musculus | 10090 | Chordata | Chordata | 281 | 1.68e-71 | NTclustered | gi|56710365|gb|AC153841.1| | 10090 | g8853 | i0 | 97.006 | 1.97076023391813 | 167 | 5 | 98 | 0 | 1 | 167 | 16775 | 16941 | Mus musculus 6 BAC RP23-260M5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence | blastn | 337 | 281 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 8272860 | 8272860 | PRJNA645397_P_NODE_8447_length_177_cov_1.054688_g8374_i0 | PRJNA645397 | 8447 | 177 | 1.054688 | 1.86679776 | Mus musculus | 10090 | Chordata | Chordata | 172 | 1.0999999999999999e-38 | NTclustered | gi|55774369|gb|AC134463.3| | 10090 | g8374 | i0 | 85.465 | 1.94350282485876 | 172 | 17 | 93 | 5 | 1 | 164 | 90519 | 90348 | Mus musculus BAC clone RP23-425N12 from 5, complete sequence | blastn | 344 | 172 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 9548191 | 9548191 | PRJNA645397_P_NODE_1288_length_448_cov_1.260652_g1222_i0 | PRJNA645397 | 1288 | 448 | 1.260652 | 5.64772096 | Mus musculus | 10090 | Chordata | Chordata | 715 | 0 | NTclustered | gi|73912834|gb|AC155315.6| | 10090 | g1222 | i0 | 99.242 | 20.6205357142857 | 396 | 3 | 88 | 0 | 26 | 421 | 137967 | 138362 | Mus musculus BAC clone RP23-212F18 from chromosome 7, complete sequence | blastn | 9238 | 715 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 9548192 | 9548192 | PRJNA645397_P_NODE_1948_length_377_cov_1.399390_g1876_i0 | PRJNA645397 | 1948 | 377 | 1.39939 | 5.2757003 | Mus musculus | 10090 | Chordata | Chordata | 418 | 3.0699999999999996e-112 | NTclustered | gi|51948678|gb|AC131980.9| | 10090 | g1876 | i0 | 92.953 | 22.1989389920424 | 298 | 3 | 96 | 2 | 98 | 377 | 188658 | 188361 | Mus musculus chromosome 1, clone RP24-170O7, complete sequence | blastn | 8369 | 418 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 9548200 | 9548200 | PRJNA645397_P_NODE_5748_length_218_cov_0.934911_g5675_i0 | PRJNA645397 | 5748 | 218 | 0.934911 | 2.03810598 | Mus musculus | 10090 | Chordata | Chordata | 333 | 6.149999999999999e-87 | NTclustered | gi|45774275|gb|AC142111.3| | 10090 | g5675 | i0 | 98.413 | 0.86697247706422 | 189 | 3 | 87 | 0 | 30 | 218 | 137420 | 137608 | Mus musculus BAC clone RP24-63G9 from chromosome 9, complete sequence | blastn | 189 | 333 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 10087683 | 10087683 | PRJNA645397_P_NODE_9728_length_167_cov_0.881356_g9655_i0 | PRJNA645397 | 9728 | 167 | 0.881356 | 1.47186452 | Mus | 10088 | Chordata | Chordata | 207 | 2.83e-49 | NTclustered | gi|846388176|dbj|LC062059.1| | 10090 | g9655 | i0 | 97.521 | 72.4550898203593 | 121 | 3 | 72 | 0 | 1 | 121 | 2211 | 2091 | Mus musculus mitochondrion DNA, including Cytb, tRNA-Tyr, tRNA-Pro, tRNA-Phe, 12S rRNA genes and D-loop, complete sequence, sequence_id: (14446..634)_12 | blastn | 12100 | 207 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 10823821 | 10823821 | PRJNA645397_P_NODE_10749_length_163_cov_0.912281_g10676_i0 | PRJNA645397 | 10749 | 163 | 0.912281 | 1.48701803 | Mus musculus | 10090 | Chordata | Chordata | 231 | 1.63e-56 | NTclustered | gi|22748532|gb|AC121865.2| | 10090 | g10676 | i0 | 97.778 | 2.00613496932515 | 135 | 2 | 82 | 1 | 2 | 135 | 57297 | 57163 | Mus musculus BAC clone RP24-112O1 from 8, complete sequence | blastn | 327 | 231 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 10823828 | 10823828 | PRJNA645397_P_NODE_1249_length_452_cov_3.856079_g1183_i0 | PRJNA645397 | 1249 | 452 | 3.856079 | 17.42947708 | Mus musculus | 10090 | Chordata | Chordata | 776 | 0 | NTclustered | gi|354784186|gb|JN948687.1| | 10090 | g1183 | i0 | 99.301 | 4.74115044247788 | 429 | 3 | 95 | 0 | 1 | 429 | 24436 | 24008 | Mus musculus targeted KO-first, conditional ready, lacZ-tagged mutant allele Eif3d:tm1a(EUCOMM)Hmgu; transgenic | blastn | 2143 | 776 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 11362572 | 11362572 | PRJNA645397_P_NODE_4809_length_241_cov_1.067708_g4736_i0 | PRJNA645397 | 4809 | 241 | 1.067708 | 2.57317628 | Muridae | 10066 | Chordata | Chordata | 56.5 | 0.002 | NTclustered | gi|354795753|gb|JN960254.1| | 10090 | g4736 | i0 | 100 | 1.31535269709544 | 30 | 0 | 12 | 0 | 143 | 172 | 11854 | 11883 | Mus musculus targeted KO-first, conditional ready, lacZ-tagged mutant allele Slc41a1:tm2a(EUCOMM)Hmgu; transgenic | blastn | 317 | 56.5 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 11362582 | 11362582 | PRJNA645397_S_NODE_769_length_207_cov_1.050633_g767_i0 | PRJNA645397 | 769 | 207 | 1.050633 | 2.17481031 | root | 1 | Root_unresolved | Root_unresolved | 52.8 | 0.018 | NTclustered | gi|24414589|gb|AC121905.3| | 10090 | g767 | i0 | 100 | 0.405797101449275 | 28 | 0 | 14 | 0 | 102 | 129 | 107289 | 107316 | Mus musculus BAC clone RP24-176A1 from chromosome 3, complete sequence | blastn | 84 | 52.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 12098997 | 12098997 | PRJNA645397_P_NODE_30_length_1471_cov_4.853727_g21_i0 | PRJNA645397 | 30 | 1471 | 4.853727 | 71.39832417 | Xenopus laevis | 8355 | Chordata | Chordata | 1921 | 0 | NTclustered | gi|56474874|gb|AY726636.1| | 8355 | g21 | i0 | 99.527 | 72.4881033310673 | 1056 | 4 | 95 | 1 | 393 | 1447 | 3326 | 4381 | Xenopus laevis Brg1 mRNA, complete cds | blastn | 106630 | 1921 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Amphibia | Anura | Pipidae | Xenopus | Xenopus laevis | |
| 12099023 | 12099023 | PRJNA645397_S_NODE_1150_length_178_cov_1.744186_g1148_i0 | PRJNA645397 | 1150 | 178 | 1.744186 | 3.10465108 | Xenopus laevis | 8355 | Chordata | Chordata | 267 | 4.94e-67 | NTclustered | gi|56474874|gb|AY726636.1| | 8355 | g1148 | i0 | 98.667 | 66.3820224719101 | 150 | 2 | 84 | 0 | 1 | 150 | 1664 | 1813 | Xenopus laevis Brg1 mRNA, complete cds | blastn | 11816 | 267 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Amphibia | Anura | Pipidae | Xenopus | Xenopus laevis | |
| 12099028 | 12099028 | PRJNA645397_S_NODE_50_length_514_cov_2.339785_g48_i0 | PRJNA645397 | 50 | 514 | 2.339785 | 12.0264949 | Mus musculus | 10090 | Chordata | Chordata | 902 | 0 | NTclustered | gi|20068487|emb|AL592065.7| | 10090 | g48 | i0 | 99.796 | 1.87937743190661 | 491 | 1 | 96 | 0 | 24 | 514 | 9758 | 9268 | Mouse DNA sequence from clone RP23-50E4 on chromosome 11, complete sequence | blastn | 966 | 902 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 13373650 | 13373650 | PRJNA645397_P_NODE_4811_length_241_cov_0.953125_g4738_i0 | PRJNA645397 | 4811 | 241 | 0.953125 | 2.29703125 | Mus musculus | 10090 | Chordata | Chordata | 435 | 1.84e-117 | NTclustered | gi|45774274|gb|AC122363.4| | 10090 | g4738 | i0 | 99.17 | 1 | 241 | 2 | 100 | 0 | 1 | 241 | 81302 | 81062 | Mus musculus BAC clone RP23-437C1 from chromosome 19, complete sequence | blastn | 241 | 435 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 13373652 | 13373652 | PRJNA645397_P_NODE_5011_length_235_cov_1.634409_g4938_i0 | PRJNA645397 | 5011 | 235 | 1.634409 | 3.84086115 | Mus musculus | 10090 | Chordata | Chordata | 377 | 3.06e-100 | NTclustered | gi|74213351|dbj|AK159934.1| | 10090 | g4938 | i0 | 99.517 | 7.86808510638298 | 207 | 1 | 88 | 0 | 29 | 235 | 3613 | 3819 | Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420038L08 product:unclassifiable, full insert sequence | blastn | 1849 | 377 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 13373654 | 13373654 | PRJNA645397_P_NODE_51_length_1289_cov_3.465323_g39_i0 | PRJNA645397 | 51 | 1289 | 3.465323 | 44.66801347 | Xenopus laevis | 8355 | Chordata | Chordata | 1805 | 0 | NTclustered | gi|77748229|gb|BC106242.1| | 8355 | g39 | i0 | 100 | 77.9837083010085 | 977 | 0 | 76 | 0 | 27 | 1003 | 1012 | 36 | Xenopus laevis cDNA clone IMAGE:7974916, partial cds | blastn | 100521 | 1805 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Amphibia | Anura | Pipidae | Xenopus | Xenopus laevis | |
| 13373674 | 13373674 | PRJNA645397_P_NODE_91_length_1033_cov_10.593496_g76_i0 | PRJNA645397 | 91 | 1033 | 10.593496 | 109.43081368 | Xenopus laevis | 8355 | Chordata | Chordata | 1544 | 0 | NTclustered | gi|56474874|gb|AY726636.1| | 8355 | g76 | i0 | 99.528 | 80.4114230396902 | 848 | 4 | 91 | 0 | 183 | 1030 | 2884 | 2037 | Xenopus laevis Brg1 mRNA, complete cds | blastn | 83065 | 1544 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Amphibia | Anura | Pipidae | Xenopus | Xenopus laevis | |
| 13373684 | 13373684 | PRJNA645397_S_NODE_1511_length_164_cov_1.547826_g1509_i0 | PRJNA645397 | 1511 | 164 | 1.547826 | 2.53843464 | Xenopus laevis | 8355 | Chordata | Chordata | 235 | 1.27e-57 | NTclustered | gi|56474874|gb|AY726636.1| | 8355 | g1509 | i0 | 96.479 | 10.6463414634146 | 142 | 5 | 87 | 0 | 23 | 164 | 3812 | 3953 | Xenopus laevis Brg1 mRNA, complete cds | blastn | 1746 | 235 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Amphibia | Anura | Pipidae | Xenopus | Xenopus laevis | |
| 13913107 | 13913107 | PRJNA645397_P_NODE_2311_length_353_cov_1.098684_g2239_i0 | PRJNA645397 | 2311 | 353 | 1.098684 | 3.87835452 | Cricetidae | 337677 | Chordata | Chordata | 52.8 | 0.033 | NTclustered | gi|1490865510|ref|XM_013350146.2| | 79684 | g2239 | i0 | 100 | 0.634560906515581 | 28 | 0 | 8 | 0 | 291 | 318 | 3598 | 3571 | PREDICTED: Microtus ochrogaster SET domain containing 1B (Setd1b), mRNA | blastn | 224 | 52.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Cricetidae | Microtus | Microtus ochrogaster | |
| 14648511 | 14648511 | PRJNA645397_P_NODE_10872_length_163_cov_0.868421_g10799_i0 | PRJNA645397 | 10872 | 163 | 0.868421 | 1.41552623 | Bos taurus | 9913 | Chordata | Chordata | 76.8 | 8.06e-10 | NTclustered | gi|226424008|gb|AC150651.5| | 9913 | g10799 | i0 | 95.745 | 38.6073619631902 | 47 | 2 | 29 | 0 | 15 | 61 | 56494 | 56540 | Bos taurus BAC CH240-451E16 (Children's Hospital Oakland Research Institute Bovine BAC Library complete sequence | blastn | 6293 | 76.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 14648520 | 14648520 | PRJNA645397_P_NODE_4912_length_238_cov_1.005291_g4839_i0 | PRJNA645397 | 4912 | 238 | 1.005291 | 2.39259258 | Rattus norvegicus | 10116 | Chordata | Chordata | 401 | 1.8399999999999994e-107 | NTclustered | gi|2678948830|ref|XR_010051846.1| | 10116 | g4839 | i0 | 97.059 | 195.352941176471 | 238 | 7 | 100 | 0 | 1 | 238 | 1066 | 829 | PREDICTED: Rattus norvegicus uncharacterized LOC134479001 (LOC134479001), ncRNA | blastn | 46494 | 401 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 14648530 | 14648530 | PRJNA645397_P_NODE_92_length_1033_cov_2.646341_g77_i0 | PRJNA645397 | 92 | 1033 | 2.646341 | 27.33670253 | Vulpes lagopus | 494514 | Chordata | Chordata | 58.4 | 0.002 | NTclustered | gi|2044158130|ref|XM_041735616.1| | 494514 | g77 | i0 | 100 | 0.131655372700871 | 31 | 0 | 3 | 0 | 718 | 748 | 96 | 66 | PREDICTED: Vulpes lagopus keratin, type I cytoskeletal 10-like (LOC121479820), mRNA | blastn | 136 | 58.4 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Carnivora | Canidae | Vulpes | Vulpes lagopus | |
| 15922447 | 15922447 | PRJNA645397_P_NODE_4793_length_241_cov_2.093750_g4720_i0 | PRJNA645397 | 4793 | 241 | 2.09375 | 5.0459375 | Mus musculus | 10090 | Chordata | Chordata | 405 | 1.45e-108 | NTclustered | gi|2552127984|ref|NG_206859.1| | 10090 | g4720 | i0 | 100 | 4.67219917012448 | 219 | 0 | 91 | 0 | 1 | 219 | 2958 | 3176 | Mus musculus STARR-seq mESC enhancer starr_06234 (LOC131337298) on chromosome 2 | blastn | 1126 | 405 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 15922462 | 15922462 | PRJNA645397_P_NODE_9253_length_169_cov_0.866667_g9180_i0 | PRJNA645397 | 9253 | 169 | 0.866667 | 1.46466723 | Mus musculus | 10090 | Chordata | Chordata | 265 | 1.66e-66 | NTclustered | gi|74152201|dbj|AK154119.1| | 10090 | g9180 | i0 | 98.667 | 18.8224852071006 | 150 | 1 | 89 | 1 | 20 | 169 | 1670 | 1818 | Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630003C09 product:presenilin 2, full insert sequence | blastn | 3181 | 265 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 17197573 | 17197573 | PRJNA645397_P_NODE_6574_length_202_cov_1.359477_g6501_i0 | PRJNA645397 | 6574 | 202 | 1.359477 | 2.74614354 | Mus musculus | 10090 | Chordata | Chordata | 322 | 1.21e-83 | NTclustered | gi|41014469|gb|AC092482.71| | 10090 | g6501 | i0 | 100 | 13.5148514851485 | 174 | 0 | 86 | 0 | 1 | 174 | 120034 | 119861 | Mus musculus strain C57BL/6J clone rp23-60j11, complete sequence | blastn | 2730 | 322 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 17197582 | 17197582 | PRJNA645397_P_NODE_9014_length_170_cov_1.264463_g8941_i0 | PRJNA645397 | 9014 | 170 | 1.264463 | 2.1495871 | Mus musculus | 10090 | Chordata | Chordata | 207 | 2.87e-49 | NTclustered | gi|74096685|gb|AC163033.4| | 10090 | g8941 | i0 | 97.521 | 67.0882352941177 | 121 | 3 | 71 | 0 | 27 | 147 | 190429 | 190549 | Mus musculus BAC clone RP23-432F6 from chromosome 12, complete sequence | blastn | 11405 | 207 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 17197593 | 17197593 | PRJNA645397_S_NODE_334_length_280_cov_3.316017_g332_i0 | PRJNA645397 | 334 | 280 | 3.316017 | 9.2848476 | Mus musculus | 10090 | Chordata | Chordata | 468 | 2.16e-127 | NTclustered | gi|20068487|emb|AL592065.7| | 10090 | g332 | i0 | 100 | 2.13571428571429 | 253 | 0 | 90 | 0 | 1 | 253 | 8832 | 8580 | Mouse DNA sequence from clone RP23-50E4 on chromosome 11, complete sequence | blastn | 598 | 468 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 18471895 | 18471895 | PRJNA645397_P_NODE_7535_length_188_cov_2.618705_g7462_i0 | PRJNA645397 | 7535 | 188 | 2.618705 | 4.9231654 | Mus musculus | 10090 | Chordata | Chordata | 279 | 6.79e-71 | NTclustered | gi|45774275|gb|AC142111.3| | 10090 | g7462 | i0 | 98.726 | 20.2021276595745 | 157 | 2 | 84 | 0 | 1 | 157 | 137712 | 137868 | Mus musculus BAC clone RP24-63G9 from chromosome 9, complete sequence | blastn | 3798 | 279 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 18471901 | 18471901 | PRJNA645397_S_NODE_535_length_237_cov_1.803191_g533_i0 | PRJNA645397 | 535 | 237 | 1.803191 | 4.27356267 | Mus musculus | 10090 | Chordata | Chordata | 381 | 2.3899999999999995e-101 | NTclustered | gi|20068487|emb|AL592065.7| | 10090 | g533 | i0 | 99.522 | 24.4852320675105 | 209 | 1 | 88 | 0 | 1 | 209 | 9303 | 9095 | Mouse DNA sequence from clone RP23-50E4 on chromosome 11, complete sequence | blastn | 5803 | 381 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 19746406 | 19746406 | PRJNA645397_P_NODE_10236_length_165_cov_0.896552_g10163_i0 | PRJNA645397 | 10236 | 165 | 0.896552 | 1.4793108 | Mus musculus | 10090 | Chordata | Chordata | 283 | 4.4899999999999995e-72 | NTclustered | gi|13938061|gb|BC007148.1| | 10090 | g10163 | i0 | 97.576 | 21.569696969697 | 165 | 4 | 100 | 0 | 1 | 165 | 1801 | 1965 | Mus musculus vacuolar protein sorting 26 homolog A (yeast), mRNA (cDNA clone MGC:6592 IMAGE:3485844), complete cds | blastn | 3559 | 283 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 19746423 | 19746423 | PRJNA645397_P_NODE_36_length_1400_cov_5.023686_g21_i1 | PRJNA645397 | 36 | 1400 | 5.023686 | 70.331604 | Xenopus laevis | 8355 | Chordata | Chordata | 1829 | 0 | NTclustered | gi|56474874|gb|AY726636.1| | 8355 | g21 | i1 | 99.503 | 72.8328571428571 | 1006 | 4 | 96 | 1 | 25 | 1029 | 4381 | 3376 | Xenopus laevis Brg1 mRNA, complete cds | blastn | 101966 | 1829 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Amphibia | Anura | Pipidae | Xenopus | Xenopus laevis | |
| 19746426 | 19746426 | PRJNA645397_P_NODE_4236_length_259_cov_1.466667_g4163_i0 | PRJNA645397 | 4236 | 259 | 1.466667 | 3.79866753 | Mus musculus | 10090 | Chordata | Chordata | 479 | 9.13e-131 | NTclustered | gi|45774275|gb|AC142111.3| | 10090 | g4163 | i0 | 100 | 42.4054054054054 | 259 | 0 | 100 | 0 | 1 | 259 | 137123 | 137381 | Mus musculus BAC clone RP24-63G9 from chromosome 9, complete sequence | blastn | 10983 | 479 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 19746444 | 19746444 | PRJNA645397_P_NODE_8316_length_178_cov_1.379845_g8243_i0 | PRJNA645397 | 8316 | 178 | 1.379845 | 2.4561241 | Rattus norvegicus | 10116 | Chordata | Chordata | 318 | 1.34e-82 | NTclustered | gi|2678926097|ref|XR_010060925.1| | 10116 | g8243 | i0 | 98.876 | 1 | 178 | 2 | 100 | 0 | 1 | 178 | 17623 | 17800 | PREDICTED: Rattus norvegicus uncharacterized LOC120098847 (LOC120098847), transcript variant X2, ncRNA | blastn | 178 | 318 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 19746451 | 19746451 | PRJNA645397_S_NODE_256_length_305_cov_1.027344_g254_i0 | PRJNA645397 | 256 | 305 | 1.027344 | 3.1333992 | Xenopus laevis | 8355 | Chordata | Chordata | 265 | 3.3499999999999997e-66 | NTclustered | gi|77748229|gb|BC106242.1| | 8355 | g254 | i0 | 99.315 | 41.783606557377 | 146 | 1 | 48 | 0 | 1 | 146 | 181 | 36 | Xenopus laevis cDNA clone IMAGE:7974916, partial cds | blastn | 12744 | 265 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Amphibia | Anura | Pipidae | Xenopus | Xenopus laevis | |
| 21022003 | 21022003 | PRJNA645397_P_NODE_11097_length_162_cov_0.920354_g11024_i0 | PRJNA645397 | 11097 | 162 | 0.920354 | 1.49097348 | Rattus norvegicus | 10116 | Chordata | Chordata | 189 | 9.85e-44 | NTclustered | gi|163943530|gb|AC117319.7| | 10116 | g11024 | i0 | 90.845 | 135.722222222222 | 142 | 12 | 87 | 1 | 22 | 162 | 158282 | 158141 | Rattus norvegicus BAC CH230-310G2 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence | blastn | 21987 | 189 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 21022011 | 21022011 | PRJNA645397_P_NODE_4097_length_264_cov_1.553488_g4024_i0 | PRJNA645397 | 4097 | 264 | 1.553488 | 4.10120832 | Mus musculus | 10090 | Chordata | Chordata | 444 | 3.41e-120 | NTclustered | gi|42409633|gb|AC105066.12| | 10090 | g4024 | i0 | 98.8 | 2.07575757575758 | 250 | 1 | 94 | 2 | 17 | 264 | 22177 | 21928 | Mus musculus chromosome 8, clone RP23-158A22, complete sequence | blastn | 548 | 444 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 21022018 | 21022018 | PRJNA645397_P_NODE_6357_length_206_cov_0.955414_g6284_i0 | PRJNA645397 | 6357 | 206 | 0.955414 | 1.96815284 | Mus musculus | 10090 | Chordata | Chordata | 327 | 2.6700000000000003e-85 | NTclustered | gi|56178031|gb|AC101727.8| | 10090 | g6284 | i0 | 97.409 | 1.07281553398058 | 193 | 3 | 93 | 2 | 15 | 206 | 185560 | 185751 | Mus musculus chromosome 1, clone RP23-327G3, complete sequence | blastn | 221 | 327 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 22296737 | 22296737 | PRJNA645397_P_NODE_5178_length_231_cov_1.587912_g5105_i0 | PRJNA645397 | 5178 | 231 | 1.587912 | 3.66807672 | Xenopus laevis | 8355 | Chordata | Chordata | 427 | 2.9399999999999998e-115 | NTclustered | gi|56474874|gb|AY726636.1| | 8355 | g5105 | i0 | 100 | 92.1904761904762 | 231 | 0 | 100 | 0 | 1 | 231 | 4590 | 4360 | Xenopus laevis Brg1 mRNA, complete cds | blastn | 21296 | 427 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Amphibia | Anura | Pipidae | Xenopus | Xenopus laevis | |
| 23572321 | 23572321 | PRJNA645397_P_NODE_2139_length_364_cov_1.228571_g2067_i0 | PRJNA645397 | 2139 | 364 | 1.228571 | 4.47199844 | Mus musculus | 10090 | Chordata | Chordata | 470 | 8.049999999999999e-128 | NTclustered | gi|46309686|gb|AC124453.3| | 10090 | g2067 | i0 | 92.836 | 1.99450549450549 | 335 | 6 | 92 | 1 | 30 | 364 | 27673 | 27357 | Mus musculus BAC clone RP24-225A16 from chromosome 12, complete sequence | blastn | 726 | 470 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 23572323 | 23572323 | PRJNA645397_P_NODE_279_length_752_cov_6.369844_g247_i0 | PRJNA645397 | 279 | 752 | 6.369844 | 47.90122688 | Xenopus laevis | 8355 | Chordata | Chordata | 1247 | 0 | NTclustered | gi|56474874|gb|AY726636.1| | 8355 | g247 | i0 | 99.853 | 89.9468085106383 | 678 | 1 | 90 | 0 | 29 | 706 | 1813 | 1136 | Xenopus laevis Brg1 mRNA, complete cds | blastn | 67640 | 1247 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Amphibia | Anura | Pipidae | Xenopus | Xenopus laevis | |
| 23572326 | 23572326 | PRJNA645397_P_NODE_4159_length_262_cov_1.309859_g4086_i0 | PRJNA645397 | 4159 | 262 | 1.309859 | 3.43183058 | Mus musculus | 10090 | Chordata | Chordata | 427 | 3.4e-115 | NTclustered | gi|56676400|gb|AC153728.1| | 10090 | g4086 | i0 | 97.6 | 14.1679389312977 | 250 | 5 | 95 | 1 | 14 | 262 | 44945 | 45194 | Mus musculus BAC RP23-83N17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence | blastn | 3712 | 427 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 23572345 | 23572345 | PRJNA645397_S_NODE_279_length_300_cov_1.768924_g277_i0 | PRJNA645397 | 279 | 300 | 1.768924 | 5.306772 | Mus musculus | 10090 | Chordata | Chordata | 549 | 8.119999999999997e-152 | NTclustered | gi|20068487|emb|AL592065.7| | 10090 | g277 | i0 | 99.667 | 2 | 300 | 1 | 100 | 0 | 1 | 300 | 9121 | 8822 | Mouse DNA sequence from clone RP23-50E4 on chromosome 11, complete sequence | blastn | 600 | 549 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 24845944 | 24845944 | PRJNA645397_S_NODE_140_length_379_cov_1.766667_g138_i0 | PRJNA645397 | 140 | 379 | 1.766667 | 6.69566793 | Xenopus laevis | 8355 | Chordata | Chordata | 684 | 0 | NTclustered | gi|56474874|gb|AY726636.1| | 8355 | g138 | i0 | 99.208 | 76.1635883905013 | 379 | 3 | 100 | 0 | 1 | 379 | 4365 | 3987 | Xenopus laevis Brg1 mRNA, complete cds | blastn | 28866 | 684 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Amphibia | Anura | Pipidae | Xenopus | Xenopus laevis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;