RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA645397", tax_kingdom = "Metazoa" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA645397 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5723073 5723073 PRJNA645397_P_NODE_565_length_605_cov_2.444245_g518_i0 PRJNA645397 565 605 2.444245 14.78768225 Chtenopteryx canariensis 2575580 Mollusca Mollusca 56.5 0.005   NTclustered gi|1929782321|gb|MW233728.1| 2575580 g518 i0 100 0.193388429752066 30 0 5 0 287 316 5959 5988 Chtenopteryx canariensis voucher CEP170 internal transcribed spacer 2, and 28S ribosomal RNA gene, region blastn 117 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Oegopsida Chtenopterygidae Chtenopteryx Chtenopteryx canariensis
12098991 12098991 PRJNA645397_P_NODE_10350_length_164_cov_1.582609_g10277_i0 PRJNA645397 10350 164 1.582609 2.59547876 Mytilus californianus 6549 Mollusca Mollusca 56.5 0.001   NTclustered gi|2334608986|ref|XM_052206883.1| 6549 g10277 i0 94.444 0.560975609756098 36 2 22 0 94 129 2645 2610 PREDICTED: Mytilus californianus RING finger protein 11-like (LOC127702581), mRNA blastn 92 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus californianus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;