RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA645397" and tax_clade = "Cyanobacteriota/Melainabacteria group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 2 ✖

bioproject 1

  • PRJNA645397 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1895775 1895775 PRJNA645397_P_NODE_322_length_721_cov_1.580357_g286_i0 PRJNA645397 322 721 1.580357 11.39437397 Trichocoleus desertorum 1481672 Bacteria Bacteria 60.2 4.31e-4   NTclustered gi|2531337825|gb|CP116619.1| 3023083 g286 i0 97.143 0.0485436893203883 35 1 5 0 154 188 197127 197161 Trichocoleus desertorum NBK24 chromosome blastn 35 60.2 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Leptolyngbyales Trichocoleusaceae Trichocoleus Trichocoleus desertorum
14648514 14648514 PRJNA645397_P_NODE_11112_length_162_cov_0.920354_g11039_i0 PRJNA645397 11112 162 0.920354 1.49097348 Calothrix sp. PCC 7716 2853227 Bacteria Bacteria 243 7.45e-60   NTclustered gi|2083844586|dbj|AP025018.1| 2853227 g11039 i0 99.254 227.592592592593 134 1 83 0 1 134 1857283 1857416 Calothrix sp. PCC 7716 DNA, complete genome blastn 36870 243 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Nostocales Calotrichaceae Calothrix Calothrix sp. PCC 7716

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;