RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA645397" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA645397 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10823851 10823851 PRJNA645397_P_NODE_9309_length_169_cov_0.866667_g9236_i0 PRJNA645397 9309 169 0.866667 1.46466723 Candidatus Saccharimonadia bacterium 2890869 Bacteria Bacteria 83.6 2.92e-17   NR HEX3082053.1 2890869 g9236 i0 82.4 2.69822485207101 51 9 90.5 0 16 168 103 153 HEX3082053.1 UDP-N-acetylmuramate dehydrogenase [Candidatus Saccharimonadia bacterium] diamond 456 83.6 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia       Candidatus Saccharimonadia bacterium
16461961 16461961 PRJNA645397_P_NODE_8093_length_181_cov_1.181818_g8020_i0 PRJNA645397 8093 181 1.181818 2.13909058 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 94.4 9.55e-21   NR MEI7918487.1 2026720 g8020 i0 75.9 2.86740331491713 58 14 96.1 0 6 179 437 494 MEI7918487.1 CTP synthase [Candidatus Saccharibacteria bacterium] diamond 519 94.4 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
30744835 30744835 PRJNA645397_P_NODE_6954_length_196_cov_0.979592_g6881_i0 PRJNA645397 6954 196 0.979592 1.92000032 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 105 4.69e-25   NR MDF2461419.1 2026720 g6881 i0 76.2 0.964285714285714 63 15 96.4 0 189 1 174 236 MDF2461419.1 family peptidase [Candidatus Saccharibacteria bacterium] diamond 189 105 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;