RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA643700", tax_phylum = "Thermoplasmatota" and tax_superkingdom = "Archaea"

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analysis 2

tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

  • Thermoplasmatota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA643700 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19744901 19744901 PRJNA643700_P_NODE_118276_length_381_cov_1.825301_g116721_i0 PRJNA643700 118276 381 1.825301 6.95439681 uncultured Thermoplasmata archaeon 376542 Archaea Archaea 52.8 0.036   NTclustered gi|2874253895|emb|OY970070.1| 376542 g116721 i0 100 0.073490813648294 28 0 7 0 338 365 1484957 1484930 MAG: uncultured Thermoplasmata archaeon isolate MFD04408.bin.c.5 genome assembly, chromosome: 1 blastn 28 52.8 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       uncultured Thermoplasmata archaeon
31281850 31281850 PRJNA643700_P_NODE_303575_length_208_cov_1.283019_g302019_i0 PRJNA643700 303575 208 1.283019 2.66867952 Thermoplasmatota archaeon 2806419 Archaea Archaea 42.4 0.0322   NR MCL4325535.1 2806419 g302019 i0 35.5 0.894230769230769 62 38 86.5 1 18 197 1152 1213 MCL4325535.1 protease pro-enzyme activation domain-containing protein [Thermoplasmatota archaeon] diamond 186 42.4 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;