RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA643700" and tax_phylum = "Kitrinoviricota"

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tax_superkingdom 1

tax_phylum 1

  • Kitrinoviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA643700 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27725759 27725759 PRJNA643700_P_NODE_124824_length_370_cov_0.919003_g123269_i0 PRJNA643700 124824 370 0.919003 3.4003111 Viruses 10239 Viruses Viruses 194 7.709999999999998e-55   NR QUS52660.1 2832174 g123269 i0 68.9 1.97837837837838 122 38 98.9 0 3 368 147 268 QUS52660.1 RNA-dependent RNA polymerase [Mute swan feces associated noda-like virus 2] diamond 732 194 1 Viruses   Orthornavirae Kitrinoviricota Magsaviricetes Nodamuvirales Nodaviridae   Mute swan feces associated noda-like virus 2
32021850 32021850 PRJNA643700_P_NODE_394198_length_168_cov_0.873950_g392642_i0 PRJNA643700 394198 168 0.87395 1.468236 Umbravirus 39734 Viruses Viruses 51.2 1.35e-5   NR QKW91260.1 2231771 g392642 i0 47.2 3.78571428571429 53 28 94.6 0 3 161 82 134 QKW91260.1 replication associated protein [Sclerotinia sclerotiorum umbra-like virus 3] diamond 636 51.2 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales Tombusviridae Umbravirus Sclerotinia sclerotiorum umbra-like virus 3

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;