RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA643700", tax_phylum = "Duplornaviricota" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 3 ✖

tax_phylum 1

  • Duplornaviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA643700 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24844358 24844358 PRJNA643700_P_NODE_103600_length_409_cov_3.388889_g102046_i0 PRJNA643700 103600 409 3.388889 13.86055601 Rotavirus alphagastroenteritidis 3432193 Viruses Viruses 54.7 0.011   NTclustered gi|2904589818|gb|PQ724848.1| 28875 g102046 i0 96.97 0.0806845965770171 33 0 8 1 41 72 1026 1058 Rotavirus A isolate RVA/Rat/China/LH1221/2022/G3P[10] VP1 gene, partial cds blastn 33 54.7 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Rotavirus Rotavirus alphagastroenteritidis
29480920 29480920 PRJNA643700_P_NODE_380090_length_172_cov_1.065041_g378534_i0 PRJNA643700 380090 172 1.065041 1.83187052 Betachrysovirus aspergilli 2164061 Viruses Viruses 62 2.31e-9   NR YP_010088025.1 2164061 g378534 i0 56.9 0.88953488372093 51 22 89 0 20 172 323 373 YP_010088025.1 capsid protein [Betachrysovirus aspergilli] diamond 153 62 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Chrysoviridae Betachrysovirus Betachrysovirus aspergilli
30586635 30586635 PRJNA643700_P_NODE_410333_length_165_cov_0.896552_g408777_i0 PRJNA643700 410333 165 0.896552 1.4793108 Betachrysovirus aspergilli 2164061 Viruses Viruses 66.2 6.51e-11   NR YP_010088028.1 2164061 g408777 i0 62 0.909090909090909 50 19 90.9 0 15 164 248 297 YP_010088028.1 RNA-dependent RNA polymerase [Betachrysovirus aspergilli] diamond 150 66.2 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Chrysoviridae Betachrysovirus Betachrysovirus aspergilli

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;