contig_metadata
17 rows where bioproject = "PRJNA643700", tax_kingdom = "Bacillati" and tax_phylum = "Mycoplasmatota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 618269 | 618269 | PRJNA643700_P_NODE_410801_length_165_cov_0.896552_g409245_i0 | PRJNA643700 | 410801 | 165 | 0.896552 | 1.4793108 | Mycoplasmataceae bacterium T2110 | 363696 | Bacteria | Bacteria | 200 | 4.659999999999998e-47 | NTclustered | gi|83962876|gb|DQ318957.1| | 363696 | g409245 | i0 | 88.485 | 46.2909090909091 | 165 | 19 | 100 | 0 | 1 | 165 | 288 | 124 | Mycoplasmataceae bacterium T2110 16S ribosomal RNA gene, partial sequence | blastn | 7638 | 200 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasmataceae bacterium T2110 | |||
| 1894277 | 1894277 | PRJNA643700_P_NODE_182262_length_295_cov_2.878049_g180706_i0 | PRJNA643700 | 182262 | 295 | 2.878049 | 8.49024455 | Mesoplasma florum | 2151 | Bacteria | Bacteria | 52.8 | 0.027 | NTclustered | gi|1359437501|gb|CP022513.1| | 2151 | g180706 | i0 | 100 | 0.0949152542372881 | 28 | 0 | 9 | 0 | 114 | 141 | 714324 | 714297 | Mesoplasma florum strain CnuA-2 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Entomoplasmatales | Entomoplasmataceae | Mesoplasma | Mesoplasma florum | ||
| 1894318 | 1894318 | PRJNA643700_P_NODE_246342_length_242_cov_1.492228_g244786_i0 | PRJNA643700 | 246342 | 242 | 1.492228 | 3.61119176 | Candidatus Hepatoplasma vulgare | 3132032 | Bacteria | Bacteria | 52.8 | 0.022 | NTclustered | gi|2416256354|dbj|AP027131.1| | 3132032 | g244786 | i0 | 100 | 0.115702479338843 | 28 | 0 | 12 | 0 | 13 | 40 | 29788 | 29761 | MAG: Candidatus Hepatoplasma vulgare Av-JP DNA, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Candidatus Hepatoplasmataceae | Candidatus Hepatoplasma | Candidatus Hepatoplasma vulgare | ||
| 1894552 | 1894552 | PRJNA643700_P_NODE_99702_length_418_cov_1.821138_g98149_i0 | PRJNA643700 | 99702 | 418 | 1.821138 | 7.61235684 | Spiroplasma helicoides | 216938 | Bacteria | Bacteria | 52.8 | 0.04 | NTclustered | gi|1060138310|gb|CP017015.1| | 216938 | g98149 | i0 | 100 | 0.0669856459330144 | 28 | 0 | 7 | 0 | 113 | 140 | 740135 | 740162 | Spiroplasma helicoides strain TABS-2 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Entomoplasmatales | Spiroplasmataceae | Spiroplasma | Spiroplasma helicoides | ||
| 3168865 | 3168865 | PRJNA643700_P_NODE_123943_length_371_cov_2.406832_g122388_i0 | PRJNA643700 | 123943 | 371 | 2.406832 | 8.92934672 | Spiroplasma endosymbiont of Polydrusus pterygomalis | 3139327 | Bacteria | Bacteria | 58.4 | 7.58e-4 | NTclustered | gi|2719437748|emb|OZ034909.1| | 3139327 | g122388 | i0 | 97.059 | 0.183288409703504 | 34 | 1 | 9 | 0 | 275 | 308 | 122033 | 122066 | Spiroplasma endosymbiont of Polydrusus pterygomalis isolate 3de30a2b-c507-4d1c-999b-652e75e456be genome assembly, chromosome: 1 | blastn | 68 | 58.4 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Entomoplasmatales | Spiroplasmataceae | Spiroplasma | Spiroplasma endosymbiont of Polydrusus pterygomalis | ||
| 5721750 | 5721750 | PRJNA643700_P_NODE_381565_length_171_cov_1.278689_g380009_i0 | PRJNA643700 | 381565 | 171 | 1.278689 | 2.18655819 | Metamycoplasma faucium | 56142 | Bacteria | Bacteria | 56.5 | 0.001 | NTclustered | gi|2708452869|gb|CP088155.1| | 56142 | g380009 | i0 | 100 | 0.350877192982456 | 30 | 0 | 18 | 0 | 3 | 32 | 94173 | 94202 | Metamycoplasma faucium strain UMCG-MFM1 chromosome, complete genome | blastn | 60 | 56.5 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Metamycoplasma | Metamycoplasma faucium | |||
| 6996774 | 6996774 | PRJNA643700_P_NODE_352726_length_184_cov_1.511111_g351170_i0 | PRJNA643700 | 352726 | 184 | 1.511111 | 2.78044424 | Spiroplasma chrysopicola | 216933 | Bacteria | Bacteria | 56.5 | 0.001 | NTclustered | gi|506965883|gb|CP005077.1| | 1276227 | g351170 | i0 | 100 | 0.16304347826087 | 30 | 0 | 16 | 0 | 74 | 103 | 34942 | 34913 | Spiroplasma chrysopicola DF-1, complete genome | blastn | 30 | 56.5 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Entomoplasmatales | Spiroplasmataceae | Spiroplasma | Spiroplasma chrysopicola | ||
| 9546680 | 9546680 | PRJNA643700_P_NODE_201288_length_277_cov_2.184211_g199732_i0 | PRJNA643700 | 201288 | 277 | 2.184211 | 6.05026447 | Malacoplasma muris | 2119 | Bacteria | Bacteria | 52.8 | 0.025 | NTclustered | gi|2890642799|gb|CP177248.1| | 2119 | g199732 | i0 | 100 | 0.101083032490975 | 28 | 0 | 10 | 0 | 61 | 88 | 506612 | 506639 | Malacoplasma muris strain RIII-4 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Mycoplasmoidaceae | Malacoplasma | Malacoplasma muris | |||
| 13912654 | 13912654 | PRJNA643700_P_NODE_347911_length_186_cov_1.693431_g346355_i0 | PRJNA643700 | 347911 | 186 | 1.693431 | 3.14978166 | Ureaplasma | 2129 | Bacteria | Bacteria | 52.8 | 0.016 | NTclustered | gi|2177595200|gb|CP086123.1| | 2130 | g346355 | i0 | 100 | 2.25806451612903 | 28 | 0 | 15 | 0 | 92 | 119 | 588043 | 588070 | Ureaplasma urealyticum strain MIN-201 chromosome, complete genome | blastn | 420 | 52.8 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Mycoplasmoidaceae | Ureaplasma | Ureaplasma urealyticum | |||
| 14646981 | 14646981 | PRJNA643700_P_NODE_184652_length_293_cov_1.704918_g183096_i0 | PRJNA643700 | 184652 | 293 | 1.704918 | 4.99540974 | Spiroplasma citri | 2133 | Bacteria | Bacteria | 56.5 | 0.002 | NTclustered | gi|2476924698|gb|CP096808.1| | 2133 | g183096 | i0 | 100 | 0.102389078498294 | 30 | 0 | 10 | 0 | 254 | 283 | 530090 | 530061 | Spiroplasma citri strain D12 chromosome, complete genome | blastn | 30 | 56.5 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Entomoplasmatales | Spiroplasmataceae | Spiroplasma | Spiroplasma citri | ||
| 19010148 | 19010148 | PRJNA643700_P_NODE_292035_length_214_cov_1.290909_g290479_i0 | PRJNA643700 | 292035 | 214 | 1.290909 | 2.76254526 | Spiroplasma | 2132 | Bacteria | Bacteria | 52.8 | 0.019 | NTclustered | gi|2719437843|emb|OZ034965.1| | 3066313 | g290479 | i0 | 100 | 0.654205607476635 | 28 | 0 | 13 | 0 | 104 | 131 | 510566 | 510539 | Spiroplasma endosymbiont of Zeiraphera isertana isolate 54782 genome assembly, chromosome: 1 | blastn | 140 | 52.8 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Entomoplasmatales | Spiroplasmataceae | Spiroplasma | Spiroplasma endosymbiont of Zeiraphera isertana | ||
| 19744909 | 19744909 | PRJNA643700_P_NODE_131036_length_360_cov_1.443730_g129481_i0 | PRJNA643700 | 131036 | 360 | 1.44373 | 5.197428 | Spiroplasma litorale | 216942 | Bacteria | Bacteria | 52.8 | 0.034 | NTclustered | gi|915477727|gb|CP012357.1| | 216942 | g129481 | i0 | 100 | 0.0777777777777778 | 28 | 0 | 8 | 0 | 56 | 83 | 302531 | 302558 | Spiroplasma litorale strain TN-1, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Entomoplasmatales | Spiroplasmataceae | Spiroplasma | Spiroplasma litorale | ||
| 21020433 | 21020433 | PRJNA643700_P_NODE_124737_length_370_cov_1.457944_g123182_i0 | PRJNA643700 | 124737 | 370 | 1.457944 | 5.3943928 | Spiroplasma endosymbiont of Diplazon laetatorius | 3066322 | Bacteria | Bacteria | 58.4 | 7.56e-4 | NTclustered | gi|2706542397|emb|OZ026458.1| | 3066322 | g123182 | i0 | 100 | 0.0837837837837838 | 31 | 0 | 8 | 0 | 51 | 81 | 333707 | 333737 | Spiroplasma endosymbiont of Diplazon laetatorius isolate 54808 genome assembly, chromosome: 1 | blastn | 31 | 58.4 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Entomoplasmatales | Spiroplasmataceae | Spiroplasma | Spiroplasma endosymbiont of Diplazon laetatorius | ||
| 21020648 | 21020648 | PRJNA643700_P_NODE_397857_length_167_cov_0.881356_g396301_i0 | PRJNA643700 | 397857 | 167 | 0.881356 | 1.47186452 | [Mycoplasma] anseris | 92400 | Bacteria | Bacteria | 54.7 | 0.004 | NTclustered | gi|1417668539|gb|CP030140.1| | 92400 | g396301 | i0 | 100 | 0.173652694610778 | 29 | 0 | 17 | 0 | 105 | 133 | 8856 | 8828 | [Mycoplasma] anseris strain ATCC 49234 chromosome, complete genome | blastn | 29 | 54.7 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Metamycoplasma | [Mycoplasma] anseris | |||
| 22836115 | 22836115 | PRJNA643700_P_NODE_309358_length_205_cov_1.250000_g307802_i0 | PRJNA643700 | 309358 | 205 | 1.25 | 2.5625 | Mycoplasma | 2093 | Bacteria | Bacteria | 178 | 2.8299999999999993e-40 | NTclustered | gi|526641996|ref|NR_103993.1| | 29501 | g307802 | i0 | 92.683 | 47.9170731707317 | 123 | 9 | 60 | 0 | 56 | 178 | 509 | 387 | Mycoplasma haemofelis strain Langford 1 23S ribosomal RNA gene, complete sequence | blastn | 9823 | 178 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma haemofelis | ||
| 23570813 | 23570813 | PRJNA643700_P_NODE_211379_length_268_cov_2.566210_g209823_i0 | PRJNA643700 | 211379 | 268 | 2.56621 | 6.8774428 | Mycoplasmopsis bovis | 28903 | Bacteria | Bacteria | 60.2 | 1.47e-4 | NTclustered | gi|1951465684|gb|CP058422.1| | 28903 | g209823 | i0 | 100 | 0.119402985074627 | 32 | 0 | 12 | 0 | 4 | 35 | 232123 | 232092 | Mycoplasmopsis bovis strain Mb252 chromosome | blastn | 32 | 60.2 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Mycoplasmopsis | Mycoplasmopsis bovis | |||
| 24844693 | 24844693 | PRJNA643700_P_NODE_90660_length_439_cov_2.302564_g89109_i0 | PRJNA643700 | 90660 | 439 | 2.302564 | 10.10825596 | Mycoplasmopsis gallinacea | 29556 | Bacteria | Bacteria | 54.7 | 0.012 | NTclustered | gi|1563682195|emb|LR214950.1| | 29556 | g89109 | i0 | 96.875 | 0.200455580865604 | 32 | 1 | 7 | 0 | 83 | 114 | 798333 | 798302 | Mycoplasma gallinaceum strain NCTC10183 genome assembly, chromosome: 1 | blastn | 88 | 54.7 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Mycoplasmopsis | Mycoplasmopsis gallinacea |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;