RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA643700", tax_clade = "Sar" and tax_phylum = "Bacillariophyta"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Bacillariophyta · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA643700 · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19010158 19010158 PRJNA643700_P_NODE_317055_length_201_cov_1.368421_g315499_i0 PRJNA643700 317055 201 1.368421 2.75052621 Skeletonema 2842 SAR_Eukaryotes SAR_Eukaryotes 158 3.6e-34   NTclustered gi|2739942906|dbj|LC814766.1| 2843 g315499 i0 83.333 82.0099502487562 174 25 85 3 16 185 36781 36954 Skeletonema costatum SCHP35 mitochondrial DNA, complete genome blastn 16484 159 0.993710691823899 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Thalassiosirales Skeletonemataceae Skeletonema Skeletonema costatum
31851175 31851175 PRJNA643700_P_NODE_242157_length_245_cov_1.326531_g240601_i0 PRJNA643700 242157 245 1.326531 3.25000095 Discostella pseudostelligera 259834 SAR_Eukaryotes SAR_Eukaryotes 42.4 0.048   NR KAL3759979.1 259834 g240601 i0 30.3 0.808163265306122 66 46 80.8 0 240 43 110 175 KAL3759979.1 hypothetical protein ACHAWU_000602 [Discostella pseudostelligera] diamond 198 42.4 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Stephanodiscales Stephanodiscaceae Discostella Discostella pseudostelligera

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;