contig_metadata
18 rows where bioproject = "PRJNA643700" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 6262351 | 6262351 | PRJNA643700_P_NODE_289525_length_215_cov_2.192771_g287969_i0 | PRJNA643700 | 289525 | 215 | 2.192771 | 4.71445765 | Waddlia | 71666 | Bacteria | Bacteria | 52.8 | 0.019 | NTclustered | gi|297375547|gb|CP001928.1| | 716544 | g287969 | i0 | 100 | 0.26046511627907 | 28 | 0 | 13 | 0 | 15 | 42 | 522886 | 522859 | Waddlia chondrophila WSU 86-1044, complete genome | blastn | 56 | 52.8 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Waddliaceae | Waddlia | Waddlia chondrophila | |
| 6996716 | 6996716 | PRJNA643700_P_NODE_292186_length_214_cov_1.260606_g290630_i0 | PRJNA643700 | 292186 | 214 | 1.260606 | 2.69769684 | Planctomyces sp. SH-PL62 | 1636152 | Bacteria | Bacteria | 318 | 1.68e-82 | NTclustered | gi|1015454008|gb|CP011273.1| | 1636152 | g290630 | i0 | 93.548 | 157.906542056075 | 217 | 8 | 100 | 5 | 1 | 214 | 1156012 | 1156225 | Planctomyces sp. SH-PL62, complete genome | blastn | 33792 | 318 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Planctomyces | Planctomyces sp. SH-PL62 | |
| 8271366 | 8271366 | PRJNA643700_P_NODE_200547_length_278_cov_1.506550_g198991_i0 | PRJNA643700 | 200547 | 278 | 1.50655 | 4.188209 | Candidatus Jettenia caeni | 247490 | Bacteria | Bacteria | 54.7 | 0.007 | NTclustered | gi|2556874801|gb|CP129467.1| | 247490 | g198991 | i0 | 100 | 0.10431654676259 | 29 | 0 | 10 | 0 | 55 | 83 | 2781608 | 2781580 | MAG: Candidatus Jettenia caeni isolate YC-1 chromosome, complete genome | blastn | 29 | 54.7 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Candidatus Brocadiia | Candidatus Brocadiales | Candidatus Brocadiaceae | Candidatus Jettenia | Candidatus Jettenia caeni | |
| 15921030 | 15921030 | PRJNA643700_P_NODE_312153_length_203_cov_2.246753_g310597_i0 | PRJNA643700 | 312153 | 203 | 2.246753 | 4.56090859 | Candidatus Kuenenia stuttgartensis | 174633 | Bacteria | Bacteria | 52.8 | 0.018 | NTclustered | gi|1818975054|gb|CP049055.1| | 174633 | g310597 | i0 | 100 | 0.551724137931034 | 28 | 0 | 14 | 0 | 49 | 76 | 3413704 | 3413677 | Candidatus Kuenenia stuttgartiensis strain CSTR1 chromosome, complete genome | blastn | 112 | 52.8 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Candidatus Brocadiia | Candidatus Brocadiales | Candidatus Brocadiaceae | Candidatus Kuenenia | Candidatus Kuenenia stuttgartensis | |
| 21020618 | 21020618 | PRJNA643700_P_NODE_379097_length_172_cov_1.504065_g377541_i0 | PRJNA643700 | 379097 | 172 | 1.504065 | 2.5869918 | uncultured Gemmataceae bacterium | 1914239 | Bacteria | Bacteria | 285 | 1.31e-72 | NTclustered | gi|2874253853|emb|OY969909.1| | 1914239 | g377541 | i0 | 96.532 | 165.831395348837 | 173 | 4 | 100 | 2 | 1 | 172 | 2002704 | 2002533 | MAG: uncultured Gemmataceae bacterium isolate MFD01275.bin.c.1 genome assembly, chromosome: 1 | blastn | 28523 | 285 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 22295222 | 22295222 | PRJNA643700_P_NODE_269658_length_227_cov_1.168539_g268102_i0 | PRJNA643700 | 269658 | 227 | 1.168539 | 2.65258353 | Tepidisphaeraceae bacterium | 2876886 | Bacteria | Bacteria | 54.7 | 0.006 | NTclustered | gi|2874253799|emb|OY969783.1| | 2876886 | g268102 | i0 | 100 | 0.127753303964758 | 29 | 0 | 13 | 0 | 33 | 61 | 4471859 | 4471887 | MAG: Tepidisphaeraceae bacterium isolate MFD04580.bin.c.1 genome assembly, chromosome: 1 | blastn | 29 | 54.7 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Tepidisphaerales | Tepidisphaeraceae | Tepidisphaeraceae bacterium | ||
| 27049757 | 27049757 | PRJNA643700_P_NODE_184602_length_293_cov_1.758197_g183046_i0 | PRJNA643700 | 184602 | 293 | 1.758197 | 5.15151721 | Candidatus Omnitrophota bacterium | 2035772 | Bacteria | Bacteria | 44.7 | 0.0138 | NR | MBL7071077.1 | 2035772 | g183046 | i0 | 42.3 | 0.532423208191126 | 52 | 28 | 51.2 | 1 | 112 | 261 | 131 | 182 | MBL7071077.1 hypothetical protein [Candidatus Omnitrophota bacterium] | diamond | 156 | 44.7 | 1 | Bacteria | PVC group | Pseudomonadati | Candidatus Omnitrophota | Candidatus Omnitrophota bacterium | |||||
| 27302659 | 27302659 | PRJNA643700_P_NODE_305003_length_207_cov_1.601266_g303447_i0 | PRJNA643700 | 305003 | 207 | 1.601266 | 3.31462062 | Sedimentisphaerales bacterium | 2813034 | Bacteria | Bacteria | 43.5 | 0.0123 | NR | MBN2139066.1 | 2813034 | g303447 | i0 | 43.5 | 0.666666666666667 | 46 | 26 | 66.7 | 0 | 47 | 184 | 421 | 466 | MBN2139066.1 gamma-glutamylcyclotransferase [Sedimentisphaerales bacterium] | diamond | 138 | 43.5 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Sedimentisphaerales | Sedimentisphaerales bacterium | |||
| 27586873 | 27586873 | PRJNA643700_P_NODE_288744_length_216_cov_1.209581_g287188_i0 | PRJNA643700 | 288744 | 216 | 1.209581 | 2.61269496 | Pirellulales bacterium | 2715253 | Bacteria | Bacteria | 43.9 | 0.0105 | NR | HZZ29994.1 | 2715253 | g287188 | i0 | 37.7 | 0.736111111111111 | 53 | 30 | 69.4 | 1 | 7 | 156 | 39 | 91 | HZZ29994.1 TolC family protein [Pirellulales bacterium] | diamond | 159 | 43.9 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulales bacterium | |||
| 27870840 | 27870840 | PRJNA643700_P_NODE_221385_length_260_cov_2.298578_g219829_i0 | PRJNA643700 | 221385 | 260 | 2.298578 | 5.9763028 | Victivallaceae bacterium | 2793042 | Bacteria | Bacteria | 45.4 | 0.00518 | NR | MDD4180908.1 | 2793042 | g219829 | i0 | 42.5 | 0.461538461538462 | 40 | 22 | 45 | 1 | 201 | 85 | 32 | 71 | MDD4180908.1 beta-galactosidase trimerization domain-containing protein [Victivallaceae bacterium] | diamond | 120 | 45.4 | 1 | Bacteria | PVC group | Pseudomonadati | Lentisphaerota | Lentisphaeria | Victivallales | Victivallaceae | Victivallaceae bacterium | ||
| 27902324 | 27902324 | PRJNA643700_P_NODE_412345_length_164_cov_1.356522_g410789_i0 | PRJNA643700 | 412345 | 164 | 1.356522 | 2.22469608 | Verrucomicrobia bacterium Tous-C9LFEB | 1982333 | Bacteria | Bacteria | 41.6 | 0.0334 | NR | PAW77838.1 | 1982333 | g410789 | i0 | 39 | 0.75 | 41 | 25 | 75 | 0 | 142 | 20 | 467 | 507 | PAW77838.1 MAG: hypothetical protein B9S32_09555 [Verrucomicrobia bacterium Tous-C9LFEB] | diamond | 123 | 41.6 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobia bacterium Tous-C9LFEB | |||||
| 28313071 | 28313071 | PRJNA643700_P_NODE_236886_length_248_cov_15.321608_g235330_i0 | PRJNA643700 | 236886 | 248 | 15.321608 | 37.99758784 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 43.5 | 0.0216 | NR | MEK0445437.1 | 2026799 | g235330 | i0 | 38 | 0.604838709677419 | 50 | 31 | 60.5 | 0 | 76 | 225 | 398 | 447 | MEK0445437.1 hypothetical protein [Verrucomicrobiota bacterium] | diamond | 150 | 43.5 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 28628934 | 28628934 | PRJNA643700_P_NODE_196427_length_282_cov_1.115880_g194871_i0 | PRJNA643700 | 196427 | 282 | 1.11588 | 3.1467816 | Lentisphaeria bacterium | 2053569 | Bacteria | Bacteria | 43.9 | 0.0198 | NR | MBR1965056.1 | 2053569 | g194871 | i0 | 32.3 | 0.659574468085106 | 62 | 42 | 66 | 0 | 51 | 236 | 15 | 76 | MBR1965056.1 hypothetical protein [Lentisphaeria bacterium] | diamond | 186 | 43.9 | 1 | Bacteria | PVC group | Pseudomonadati | Lentisphaerota | Lentisphaeria | Lentisphaeria bacterium | ||||
| 28692070 | 28692070 | PRJNA643700_P_NODE_230787_length_253_cov_1.754902_g229231_i0 | PRJNA643700 | 230787 | 253 | 1.754902 | 4.43990206 | Chlamydiales bacterium | 2047757 | Bacteria | Bacteria | 43.1 | 0.0297 | NR | MDR2540118.1 | 2047757 | g229231 | i0 | 40.7 | 0.640316205533597 | 54 | 29 | 60.5 | 2 | 98 | 250 | 64 | 117 | MDR2540118.1 NAD(P)-dependent oxidoreductase [Chlamydiales bacterium] | diamond | 162 | 43.1 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiales bacterium | |||
| 29165701 | 29165701 | PRJNA643700_P_NODE_135009_length_354_cov_1.032787_g133454_i0 | PRJNA643700 | 135009 | 354 | 1.032787 | 3.65606598 | Phycisphaerales bacterium | 2052180 | Bacteria | Bacteria | 44.3 | 0.033 | NR | MCA9280103.1 | 2052180 | g133454 | i0 | 36.7 | 0.508474576271186 | 60 | 33 | 50.8 | 1 | 314 | 135 | 116 | 170 | MCA9280103.1 UDP-glucose 4-epimerase GalE [Phycisphaerales bacterium] | diamond | 180 | 44.3 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaerales bacterium | |||
| 29733555 | 29733555 | PRJNA643700_P_NODE_180970_length_297_cov_1.258065_g179414_i0 | PRJNA643700 | 180970 | 297 | 1.258065 | 3.73645305 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 42.7 | 0.0409 | NR | RMF76061.1 | 2026780 | g179414 | i0 | 37.7 | 0.535353535353535 | 53 | 22 | 53.5 | 1 | 29 | 187 | 12 | 53 | RMF76061.1 MAG: hypothetical protein D6744_12685 [Planctomycetota bacterium] | diamond | 159 | 42.7 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 30934450 | 30934450 | PRJNA643700_P_NODE_359214_length_181_cov_1.545455_g357658_i0 | PRJNA643700 | 359214 | 181 | 1.545455 | 2.79727355 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 42 | 0.0304 | NR | MFM1748863.1 | 2026799 | g357658 | i0 | 38.8 | 0.812154696132597 | 49 | 25 | 81.2 | 1 | 150 | 4 | 16 | 59 | MFM1748863.1 hypothetical protein [Verrucomicrobiota bacterium] | diamond | 147 | 42 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 31471933 | 31471933 | PRJNA643700_P_NODE_274736_length_224_cov_1.188571_g273180_i0 | PRJNA643700 | 274736 | 224 | 1.188571 | 2.66239904 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 42.7 | 0.0289 | NR | MBN1807603.1 | 2026780 | g273180 | i0 | 41.5 | 0.549107142857143 | 41 | 24 | 54.9 | 0 | 139 | 17 | 181 | 221 | MBN1807603.1 MFS transporter [Planctomycetota bacterium] | diamond | 123 | 42.7 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;