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contig_metadata

8 rows where bioproject = "PRJNA643700" and tax_clade = "Amoebozoa"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Amoebozoa · 8 ✖

bioproject 1

  • PRJNA643700 · 8 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4445816 4445816 PRJNA643700_P_NODE_273884_length_224_cov_2.080000_g272328_i0 PRJNA643700 273884 224 2.08 4.6592 Dictyostelium discoideum 44689 Evosea other_Eukaryota 54.7 0.006   NTclustered gi|66808720|ref|XM_632991.1| 352472 g272328 i0 100 0.129464285714286 29 0 13 0 91 119 112 140 Dictyostelium discoideum AX4 hypothetical protein (DDB_G0285483) mRNA, complete cds blastn 29 54.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
6996914 6996914 PRJNA643700_P_NODE_56146_length_556_cov_1.268245_g54657_i0 PRJNA643700 56146 556 1.268245 7.0514422 Cavenderia fasciculata 261658 Evosea other_Eukaryota 56.5 0.004   NTclustered gi|470264596|ref|XM_004361195.1| 261658 g54657 i0 100 0.0539568345323741 30 0 5 0 299 328 185 156 Cavenderia fasciculata acid ceramidase-like protein (dcd1A), partial mRNA blastn 30 56.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
8271497 8271497 PRJNA643700_P_NODE_369107_length_176_cov_2.850394_g367551_i0 PRJNA643700 369107 176 2.850394 5.01669344 Dictyostelium discoideum 44689 Evosea other_Eukaryota 54.7 0.004   NTclustered gi|66807904|ref|XM_632583.1| 352472 g367551 i0 94.286 0.198863636363636 35 2 20 0 13 47 5168 5134 Dictyostelium discoideum AX4 vacuolar protein sorting-associated protein 13 family protein (vps13D) mRNA, complete cds blastn 35 54.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
13372378 13372378 PRJNA643700_P_NODE_430451_length_155_cov_2.160377_g428895_i0 PRJNA643700 430451 155 2.160377 3.34858435 Heterostelium album 2086695 Evosea other_Eukaryota 52.8 0.013   NTclustered gi|1160552810|ref|XM_020571739.1| 670386 g428895 i0 100 0.361290322580645 28 0 18 0 128 155 3887 3914 Polysphondylium pallidum PN500 inositol 1,4,5-trisphosphate receptor-like protein (iplA), partial mRNA blastn 56 52.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
15187233 15187233 PRJNA643700_P_NODE_67612_length_509_cov_1.547826_g66084_i0 PRJNA643700 67612 509 1.547826 7.87843434 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 56.5 0.004   NTclustered gi|330790870|ref|XM_003283471.1| 5786 g66084 i0 97.059 0.18467583497053 34 0 6 1 96 128 262 229 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_74487), partial mRNA blastn 94 56.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
17196041 17196041 PRJNA643700_P_NODE_277774_length_222_cov_1.502890_g276218_i0 PRJNA643700 277774 222 1.50289 3.3364158 Dictyostelium discoideum 44689 Evosea other_Eukaryota 52.8 0.02   NTclustered gi|66806462|ref|XM_631862.1| 352472 g276218 i0 100 0.126126126126126 28 0 13 0 7 34 1308 1281 Dictyostelium discoideum AX4 hypothetical protein (DDB_G0288045) mRNA, complete cds blastn 28 52.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
21020482 21020482 PRJNA643700_P_NODE_201877_length_277_cov_1.070175_g200321_i0 PRJNA643700 201877 277 1.070175 2.96438475 Cavenderia fasciculata 261658 Evosea other_Eukaryota 52.8 0.025   NTclustered gi|470237675|ref|XM_004350744.1| 261658 g200321 i0 100 0.101083032490975 28 0 10 0 166 193 97 124 Cavenderia fasciculata uncharacterized protein (DFA_11851), partial mRNA blastn 28 52.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
24844666 24844666 PRJNA643700_P_NODE_425380_length_162_cov_0.920354_g423824_i0 PRJNA643700 425380 162 0.920354 1.49097348 Dictyostelium discoideum 44689 Evosea other_Eukaryota 52.8 0.013   NTclustered gi|66800378|ref|XM_629113.1| 352472 g423824 i0 100 0.172839506172839 28 0 17 0 66 93 3446 3473 Dictyostelium discoideum AX4 hypothetical protein (DDB_G0293476) mRNA, complete cds blastn 28 52.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;