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contig_metadata

22 rows where bioproject = "PRJNA642647" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 22 ✖

tax_clade 1

bioproject 1

  • PRJNA642647 · 22 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1894190 1894190 PRJNA642647_P_NODE_2262_length_228_cov_2.643979_g2212_i0 PRJNA642647 2262 228 2.643979 6.02827212 Verrucomonas bifida 629763 SAR_Eukaryotes SAR_Eukaryotes 163 8.999999999999999e-36   NTclustered gi|290760488|gb|GQ144691.1| 629763 g2212 i0 90.4 86.7675438596491 125 10 55 2 101 225 1769 1647 Cercozoa sp. CC-2009e large subunit ribosomal RNA gene, partial sequence blastn 19783 163 1 Eukaryota Sar   Cercozoa Thecofilosea Ventricleftida   Verrucomonas Verrucomonas bifida
1894232 1894232 PRJNA642647_P_NODE_882_length_376_cov_14.820059_g832_i0 PRJNA642647 882 376 14.820059 55.72342184 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 379 1.45e-100   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g832 i0 86.464 58.875 362 29 95 11 16 373 4018 3673 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 22137 379 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
4986895 4986895 PRJNA642647_P_NODE_1284_length_308_cov_12.442804_g1234_i0 PRJNA642647 1284 308 12.442804 38.32383632 Paracercomonas 372085 SAR_Eukaryotes SAR_Eukaryotes 348 3.2700000000000005e-91   NTclustered gi|406609775|dbj|AB749050.1| 175275 g1234 i0 98 64.9058441558442 200 4 65 0 109 308 1327 1526 Uncultured cercozoan gene for 18S ribosomal RNA, partial sequence, clone: Cn-St.1-1 blastn 19991 348 1 Eukaryota Sar   Cercozoa         uncultured Cercozoa
5721518 5721518 PRJNA642647_P_NODE_3205_length_196_cov_3.327044_g3155_i0 PRJNA642647 3205 196 3.327044 6.52100624 Placocista sp. CC-Grouse Mountain 741089 SAR_Eukaryotes SAR_Eukaryotes 209 9.51e-50   NTclustered gi|290760485|gb|GQ144688.1| 741089 g3155 i0 92 76.9744897959184 150 11 77 1 18 167 1921 1773 Placocista sp. CC-Grouse Mountain large subunit ribosomal RNA gene, partial sequence blastn 15087 209 1 Eukaryota Sar   Cercozoa Imbricatea Euglyphida Euglyphidae Placocista Placocista sp. CC-Grouse Mountain
6996576 6996576 PRJNA642647_P_NODE_6186_length_153_cov_60.465517_g6136_i0 PRJNA642647 6186 153 60.465517 92.51224101 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 261 1.91e-65   NTclustered gi|88792583|gb|DQ386164.1| 372086 g6136 i0 97.403 161.464052287582 154 3 100 1 1 153 1699 1546 Paracercomonas marina 28S ribosomal RNA gene, partial sequence blastn 24704 261 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
8271247 8271247 PRJNA642647_P_NODE_1667_length_268_cov_4.138528_g1617_i0 PRJNA642647 1667 268 4.138528 11.09125504 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 484 2.0399999999999996e-132   NTclustered gi|238617602|gb|FJ973377.1| 188950 g1617 i0 99.257 100.347014925373 269 1 100 1 1 268 322 54 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 26893 484 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
8271274 8271274 PRJNA642647_P_NODE_3407_length_191_cov_6.207792_g3357_i0 PRJNA642647 3407 191 6.207792 11.85688272 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 346 6.73e-91   NTclustered gi|238617602|gb|FJ973377.1| 188950 g3357 i0 100 44.1832460732984 187 0 98 0 4 190 1909 1723 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 8439 346 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
8271317 8271317 PRJNA642647_P_NODE_727_length_417_cov_14.255263_g677_i0 PRJNA642647 727 417 14.255263 59.44444671 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 649 0   NTclustered gi|88792583|gb|DQ386164.1| 372086 g677 i0 94.749 101.122302158273 419 18 100 4 1 417 1986 1570 Paracercomonas marina 28S ribosomal RNA gene, partial sequence blastn 42168 649 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
9546585 9546585 PRJNA642647_P_NODE_4248_length_175_cov_2.507246_g4198_i0 PRJNA642647 4248 175 2.507246 4.3876805 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 147 6.569999999999999e-31   NTclustered gi|238617605|gb|FJ973380.1| 45107 g4198 i0 82.022 11.2628571428571 178 26 99 4 3 175 1696 1872 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 1971 147 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
9546602 9546602 PRJNA642647_P_NODE_588_length_461_cov_6.608491_g539_i0 PRJNA642647 588 461 6.608491 30.46514351 Protaspis grandis 361427 SAR_Eukaryotes SAR_Eukaryotes 531 4.7099999999999985e-146   NTclustered gi|290760486|gb|GQ144689.1| 361427 g539 i0 87.939 99.2060737527115 456 48 98 7 5 456 2122 1670 Protaspis grandis large subunit ribosomal RNA gene, partial sequence blastn 45734 531 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida Thaumatomastigidae Protaspis Protaspis grandis
10822229 10822229 PRJNA642647_P_NODE_5269_length_165_cov_3.984375_g5219_i0 PRJNA642647 5269 165 3.984375 6.57421875 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 243 7.63e-60   NTclustered gi|88792583|gb|DQ386164.1| 372086 g5219 i0 93.827 2.33939393939394 162 9 98 1 4 165 2538 2698 Paracercomonas marina 28S ribosomal RNA gene, partial sequence blastn 386 243 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
12097407 12097407 PRJNA642647_P_NODE_2810_length_207_cov_3.041176_g2760_i0 PRJNA642647 2810 207 3.041176 6.29523432 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 108 3.81e-19   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g2760 i0 82.09 8.2463768115942 134 16 63 6 4 133 3771 3900 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 1707 108 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
12097430 12097430 PRJNA642647_P_NODE_4730_length_168_cov_1.511450_g4680_i0 PRJNA642647 4730 168 1.51145 2.539236 uncultured Cercozoa 175275 SAR_Eukaryotes SAR_Eukaryotes 272 9.95e-69   NTclustered gi|1270185369|gb|MG266083.1| 175275 g4680 i0 95.833 16.6488095238095 168 7 100 0 1 168 507 340 Uncultured Cercozoa clone MossITSLSU78 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 2797 272 1 Eukaryota Sar   Cercozoa         uncultured Cercozoa
12097454 12097454 PRJNA642647_P_NODE_930_length_367_cov_16.336364_g880_i0 PRJNA642647 930 367 16.336364 59.95445588 Placocista sp. CC-Grouse Mountain 741089 SAR_Eukaryotes SAR_Eukaryotes 490 6.23e-134   NTclustered gi|290760485|gb|GQ144688.1| 741089 g880 i0 96.013 98.7683923705722 301 12 82 0 67 367 1775 2075 Placocista sp. CC-Grouse Mountain large subunit ribosomal RNA gene, partial sequence blastn 36248 490 1 Eukaryota Sar   Cercozoa Imbricatea Euglyphida Euglyphidae Placocista Placocista sp. CC-Grouse Mountain
12637730 12637730 PRJNA642647_P_NODE_3630_length_186_cov_4.429530_g3580_i0 PRJNA642647 3630 186 4.42953 8.2389258 Cercomonas 45109 SAR_Eukaryotes SAR_Eukaryotes 298 1.85e-76   NTclustered gi|161015705|gb|EF681939.1| 458867 g3580 i0 99.39 94.4569892473118 164 1 88 0 23 186 978 1141 Cercomonas sp. HFCC53 28S ribosomal RNA gene, partial sequence blastn 17569 298 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Cercomonas Cercomonas sp. HFCC53
13372023 13372023 PRJNA642647_P_NODE_3691_length_185_cov_3.283784_g3641_i0 PRJNA642647 3691 185 3.283784 6.0750004 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 108 3.32e-19   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g3641 i0 83.065 1.59459459459459 124 15 66 5 4 126 4008 3890 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 295 108 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
14646888 14646888 PRJNA642647_P_NODE_1612_length_274_cov_3.291139_g1562_i0 PRJNA642647 1612 274 3.291139 9.01772086 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 435 2.14e-117   NTclustered gi|238617602|gb|FJ973377.1| 188950 g1562 i0 95.588 1.10583941605839 272 10 99 2 4 273 397 668 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 303 435 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
14646906 14646906 PRJNA642647_P_NODE_3392_length_192_cov_1.787097_g3342_i0 PRJNA642647 3392 192 1.787097 3.43122624 Cercomonas sp. 1979794 SAR_Eukaryotes SAR_Eukaryotes 195 2.6e-45   NTclustered gi|2651357794|gb|PP174308.1| 1979794 g3342 i0 85.417 92.9114583333333 192 22 98 6 1 189 4053 3865 Cercomonas sp. isolate JGP5 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 17839 195 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Cercomonas Cercomonas sp.
18470246 18470246 PRJNA642647_P_NODE_4535_length_170_cov_8.578947_g4485_i0 PRJNA642647 4535 170 8.578947 14.5842099 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 246 6.0799999999999994e-61   NTclustered gi|88792583|gb|DQ386164.1| 372086 g4485 i0 92.899 21.6764705882353 169 12 99 0 2 170 2044 2212 Paracercomonas marina 28S ribosomal RNA gene, partial sequence blastn 3685 246 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
22295110 22295110 PRJNA642647_P_NODE_858_length_381_cov_7.741279_g808_i0 PRJNA642647 858 381 7.741279 29.49427299 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 147 1.62e-30   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g808 i0 77.903 19.4015748031496 267 37 69 17 89 351 4021 3773 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 7392 147 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
24844289 24844289 PRJNA642647_P_NODE_1220_length_317_cov_4.239286_g1170_i0 PRJNA642647 1220 317 4.239286 13.43853662 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 305 2.06e-78   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g1170 i0 84.858 53.4889589905363 317 33 99 11 1 314 3704 4008 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 16956 305 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
25384927 25384927 PRJNA642647_P_NODE_1920_length_249_cov_5.523585_g1870_i0 PRJNA642647 1920 249 5.523585 13.75372665 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 353 5.52e-93   NTclustered gi|194272470|gb|EU567263.1| 175275 g1870 i0 99.485 78.3815261044177 194 1 78 0 2 195 905 712 Uncultured cercozoan isolate se11 18S ribosomal RNA gene, partial sequence blastn 19517 353 1 Eukaryota Sar   Cercozoa         uncultured Cercozoa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;