RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA642647" and tax_phylum = "Candidatus Peregrinibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Peregrinibacteriota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA642647 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1894208 1894208 PRJNA642647_P_NODE_3522_length_189_cov_1.453947_g3472_i0 PRJNA642647 3522 189 1.453947 2.74795983 Candidatus Peribacteria bacterium 2053688 Bacteria Bacteria 52.8 0.016   NTclustered gi|2225492643|gb|CP082927.1| 2053688 g3472 i0 100 0.148148148148148 28 0 15 0 39 66 192431 192458 MAG: Candidatus Peribacteria bacterium isolate LakeFargette_0920_ALND_MAG_52_24 chromosome, complete genome blastn 28 52.8 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria       Candidatus Peribacteria bacterium
9546597 9546597 PRJNA642647_P_NODE_5408_length_163_cov_2.769841_g5358_i0 PRJNA642647 5408 163 2.769841 4.51484083 Candidatus Peribacteria bacterium 2053688 Bacteria Bacteria 141 2.82e-29   NTclustered gi|2258833497|gb|CP060226.1| 2053688 g5358 i0 91.262 125.834355828221 103 9 63 0 60 162 813318 813216 MAG: Candidatus Peribacteria bacterium isolate HK-STAS-PATE-10 chromosome, complete genome blastn 20511 141 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria       Candidatus Peribacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;