RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA642647" and tax_phylum = "Candidatus Melainabacteria"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Melainabacteria · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA642647 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10822209 10822209 PRJNA642647_P_NODE_2969_length_203_cov_2.602410_g2919_i0 PRJNA642647 2969 203 2.60241 5.2828923 Candidatus Melainabacteria bacterium MEL.A1 1899017 Bacteria Bacteria 191 3.59e-44   NTclustered gi|1079475020|gb|CP017245.1| 1899017 g2919 i0 86.034 7.00492610837438 179 24 88 1 24 202 1478225 1478402 Candidatus Melainabacteria bacterium MEL.A1 chromosome, complete genome blastn 1422 191 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium MEL.A1
23570710 23570710 PRJNA642647_P_NODE_3439_length_191_cov_1.409091_g3389_i0 PRJNA642647 3439 191 1.409091 2.69136381 Candidatus Gastranaerophilales bacterium 2137880 Bacteria Bacteria 305 1.14e-78   NTclustered gi|2729058672|emb|OZ006972.1| 2137880 g3389 i0 95.767 193.146596858639 189 8 99 0 1 189 512098 512286 MAG: Candidatus Gastranaerophilales bacterium isolate metabat2_pooled_hifiasm.1023 MAG genome assembly, chromosome: 1 blastn 36891 305 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Gastranaerophilales     Candidatus Gastranaerophilales bacterium
27713473 27713473 PRJNA642647_P_NODE_1324_length_304_cov_1.411985_g1274_i0 PRJNA642647 1324 304 1.411985 4.2924344 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 74.7 8.77e-14   NR MFA6213521.1 2364082 g1274 i0 76.7 0.424342105263158 43 10 42.4 0 158 286 1 43 MFA6213521.1 hypothetical protein [Candidatus Obscuribacterales bacterium] diamond 129 74.7 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;