contig_metadata
11 rows where bioproject = "PRJNA642647", tax_clade = "Sar" and tax_phylum = "Oomycota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5721543 | 5721543 | PRJNA642647_P_NODE_5945_length_156_cov_2.445378_g5895_i0 | PRJNA642647 | 5945 | 156 | 2.445378 | 3.81478968 | Saprolegnia parasitica | 101203 | SAR_Eukaryotes | SAR_Eukaryotes | 272 | 9.059999999999999e-69 | NTclustered | gi|813199071|ref|XR_001099870.1| | 695850 | g5895 | i0 | 98.693 | 40.2948717948718 | 153 | 2 | 98 | 0 | 1 | 153 | 928 | 776 | Saprolegnia parasitica CBS 223.65 28S ribosomal RNA rRNA | blastn | 6286 | 272 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Saprolegniaceae | Saprolegnia | Saprolegnia parasitica | ||
| 8271263 | 8271263 | PRJNA642647_P_NODE_2967_length_203_cov_2.656627_g2917_i0 | PRJNA642647 | 2967 | 203 | 2.656627 | 5.39295281 | Pythium monospermum | 92964 | SAR_Eukaryotes | SAR_Eukaryotes | 361 | 2.5899999999999994e-95 | NTclustered | gi|33520250|gb|AY273995.1| | 92964 | g2917 | i0 | 99.005 | 88.5221674876847 | 201 | 2 | 99 | 0 | 1 | 201 | 34 | 234 | Pythium monospermum large subunit ribosomal RNA gene, partial sequence | blastn | 17970 | 361 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Pythiales | Pythiaceae | Pythium | Pythium monospermum | ||
| 8271273 | 8271273 | PRJNA642647_P_NODE_3387_length_192_cov_2.232258_g3337_i0 | PRJNA642647 | 3387 | 192 | 2.232258 | 4.28593536 | Saprolegnia parasitica | 101203 | SAR_Eukaryotes | SAR_Eukaryotes | 337 | 4.079999999999999e-88 | NTclustered | gi|813199067|ref|XR_001099866.1| | 695850 | g3337 | i0 | 98.429 | 82.578125 | 191 | 3 | 99 | 0 | 2 | 192 | 460 | 270 | Saprolegnia parasitica CBS 223.65 28S ribosomal RNA rRNA | blastn | 15855 | 337 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Saprolegniaceae | Saprolegnia | Saprolegnia parasitica | ||
| 12637734 | 12637734 | PRJNA642647_P_NODE_4570_length_170_cov_2.015038_g4520_i0 | PRJNA642647 | 4570 | 170 | 2.015038 | 3.4255646 | Aphanomyces | 100860 | SAR_Eukaryotes | SAR_Eukaryotes | 248 | 1.69e-61 | NTclustered | gi|268326957|dbj|AB533282.1| | 692225 | g4520 | i0 | 96.644 | 87.6470588235294 | 149 | 5 | 88 | 0 | 1 | 149 | 180 | 328 | Aphanomyces sp. NJM 0703 genes for ITS1, 5.8S rRNA, ITS2, partial and complete sequence | blastn | 14900 | 248 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces sp. NJM 0703 | ||
| 14646885 | 14646885 | PRJNA642647_P_NODE_1332_length_303_cov_3.669173_g1282_i0 | PRJNA642647 | 1332 | 303 | 3.669173 | 11.11759419 | Saprolegnia parasitica | 101203 | SAR_Eukaryotes | SAR_Eukaryotes | 355 | 1.92e-93 | NTclustered | gi|813199067|ref|XR_001099866.1| | 695850 | g1282 | i0 | 88.514 | 75.049504950495 | 296 | 30 | 97 | 4 | 8 | 301 | 1665 | 1372 | Saprolegnia parasitica CBS 223.65 28S ribosomal RNA rRNA | blastn | 22740 | 355 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Saprolegniaceae | Saprolegnia | Saprolegnia parasitica | ||
| 14646887 | 14646887 | PRJNA642647_P_NODE_152_length_908_cov_17.653272_g127_i0 | PRJNA642647 | 152 | 908 | 17.653272 | 160.29170976 | Aphanomyces astaci | 112090 | SAR_Eukaryotes | SAR_Eukaryotes | 1162 | 0 | NTclustered | gi|698793876|ref|XR_717098.1| | 112090 | g127 | i0 | 98.195 | 85.3711453744493 | 665 | 12 | 73 | 0 | 1 | 665 | 2775 | 2111 | Aphanomyces astaci 28S ribosomal RNA rRNA | blastn | 77517 | 1162 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces astaci | ||
| 18470243 | 18470243 | PRJNA642647_P_NODE_4415_length_172_cov_4.651852_g4365_i0 | PRJNA642647 | 4415 | 172 | 4.651852 | 8.00118544 | Aphanomyces astaci | 112090 | SAR_Eukaryotes | SAR_Eukaryotes | 291 | 2.81e-74 | NTclustered | gi|698793876|ref|XR_717098.1| | 112090 | g4365 | i0 | 97.633 | 86.5232558139535 | 169 | 4 | 98 | 0 | 4 | 172 | 1911 | 2079 | Aphanomyces astaci 28S ribosomal RNA rRNA | blastn | 14882 | 291 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces astaci | ||
| 20284952 | 20284952 | PRJNA642647_P_NODE_2336_length_225_cov_3.861702_g2286_i0 | PRJNA642647 | 2336 | 225 | 3.861702 | 8.6888295 | Pythiaceae | 4782 | SAR_Eukaryotes | SAR_Eukaryotes | 398 | 2.2299999999999996e-106 | NTclustered | gi|573007533|gb|HQ643697.2| | 92964 | g2286 | i0 | 99.095 | 98.2266666666667 | 221 | 2 | 98 | 0 | 4 | 224 | 143 | 363 | Pythium monospermum voucher CBS15873 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence | blastn | 22101 | 398 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Pythiales | Pythiaceae | Pythium | Pythium monospermum | ||
| 28217996 | 28217996 | PRJNA642647_P_NODE_5526_length_162_cov_1.120000_g5476_i0 | PRJNA642647 | 5526 | 162 | 1.12 | 1.8144 | Saprolegnia parasitica CBS 223.65 | 695850 | SAR_Eukaryotes | SAR_Eukaryotes | 70.9 | 1.19e-13 | NR | XP_012202672.1 | 695850 | g5476 | i0 | 62.7 | 1.90740740740741 | 51 | 19 | 94.4 | 0 | 155 | 3 | 71 | 121 | XP_012202672.1 translation initiation factor eIF-5A [Saprolegnia parasitica CBS 223.65] | diamond | 309 | 70.9 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Saprolegniaceae | Saprolegnia | Saprolegnia parasitica | ||
| 28723488 | 28723488 | PRJNA642647_P_NODE_1367_length_300_cov_2.475285_g1317_i0 | PRJNA642647 | 1367 | 300 | 2.475285 | 7.425855 | Pythium insidiosum | 114742 | SAR_Eukaryotes | SAR_Eukaryotes | 135 | 9.54e-38 | NR | GLD98056.1 | 114742 | g1317 | i0 | 57.1 | 1.19 | 119 | 28 | 96 | 1 | 299 | 12 | 12 | 130 | GLD98056.1 hypothetical protein PINS_up006753 [Pythium insidiosum] | diamond | 357 | 135 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Pythiales | Pythiaceae | Pythium | Pythium insidiosum | ||
| 30460833 | 30460833 | PRJNA642647_P_NODE_5233_length_166_cov_1.441860_g5183_i0 | PRJNA642647 | 5233 | 166 | 1.44186 | 2.3934876 | Phytophthora fragariae | 53985 | SAR_Eukaryotes | SAR_Eukaryotes | 43.1 | 0.00328 | NR | KAE8917126.1 | 53985 | g5183 | i0 | 56 | 0.903614457831325 | 50 | 21 | 90.4 | 1 | 15 | 164 | 10 | 58 | KAE8917126.1 hypothetical protein PF009_g32553 [Phytophthora fragariae] | diamond | 150 | 43.1 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora fragariae |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;