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contig_metadata

19 rows where bioproject = "PRJNA642647", tax_clade = "Opisthokonta" and tax_phylum = "Arthropoda"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Arthropoda · 19 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 19 ✖

bioproject 1

  • PRJNA642647 · 19 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1158570 1158570 PRJNA642647_P_NODE_4441_length_172_cov_1.548148_g4391_i0 PRJNA642647 4441 172 1.548148 2.66281456 Cyclopoida 84308 Arthropoda Arthropoda 67.6 5.15e-7   NTclustered gi|1680763763|gb|MF077854.2| 2031039 g4391 i0 97.436 22.3779069767442 39 1 23 0 127 165 196 234 Cyclopinodes sp. DZMB060 28S ribosomal RNA gene, partial sequence blastn 3849 67.6 1 Eukaryota Opisthokonta Metazoa Arthropoda Hexanauplia Cyclopoida Hemicyclopinidae Cyclopinodes Cyclopinodes sp. DZMB060
1894188 1894188 PRJNA642647_P_NODE_2222_length_230_cov_2.134715_g2172_i0 PRJNA642647 2222 230 2.134715 4.9098445 Schistocerca gregaria 7010 Arthropoda Arthropoda 222 1.4799999999999999e-53   NTclustered gi|2284206805|ref|XM_049994226.1| 7010 g2172 i0 90.116 83.795652173913 172 15 74 2 33 203 3054 3224 PREDICTED: Schistocerca gregaria uncharacterized LOC126321793 (LOC126321793), mRNA blastn 19273 222 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Orthoptera Acrididae Schistocerca Schistocerca gregaria
1894207 1894207 PRJNA642647_P_NODE_3402_length_192_cov_1.090323_g3352_i0 PRJNA642647 3402 192 1.090323 2.09342016 Daphnia galeata 27404 Arthropoda Arthropoda 339 1.13e-88   NTclustered gi|3265072|gb|AF070102.1|AF070102 27404 g3352 i0 98.942 58.2916666666667 189 2 98 0 4 192 231 419 Daphnia galeata 18S ribosomal RNA gene, partial sequence blastn 11192 339 1 Eukaryota Opisthokonta Metazoa Arthropoda Branchiopoda Diplostraca Daphniidae Daphnia Daphnia galeata
4445657 4445657 PRJNA642647_P_NODE_1244_length_314_cov_3.888087_g1194_i0 PRJNA642647 1244 314 3.888087 12.20859318 Daphnia galeata 27404 Arthropoda Arthropoda 488 1.8899999999999996e-133   NTclustered gi|189172079|gb|EU595548.1| 27404 g1194 i0 94.242 105.162420382166 330 2 99 3 1 313 623 294 Daphnia galeata 28S ribosomal RNA gene, partial sequence; 28S-18S ribosomal RNA intergenic spacer, complete sequence; and 18S ribosomal RNA gene, partial sequence blastn 33021 488 1 Eukaryota Opisthokonta Metazoa Arthropoda Branchiopoda Diplostraca Daphniidae Daphnia Daphnia galeata
5721525 5721525 PRJNA642647_P_NODE_3945_length_181_cov_1.187500_g3895_i0 PRJNA642647 3945 181 1.1875 2.149375 Daphnia galeata 27404 Arthropoda Arthropoda 309 8.26e-80   NTclustered gi|22417209|gb|AF532888.1| 27404 g3895 i0 97.778 91.2541436464088 180 2 98 2 4 181 1119 940 Daphnia galeata 28S ribosomal RNA gene, partial sequence blastn 16517 309 1 Eukaryota Opisthokonta Metazoa Arthropoda Branchiopoda Diplostraca Daphniidae Daphnia Daphnia galeata
5721526 5721526 PRJNA642647_P_NODE_4065_length_179_cov_1.056338_g4015_i0 PRJNA642647 4065 179 1.056338 1.89084502 Penaeus indicus 29960 Arthropoda Arthropoda 56.5 0.001   NTclustered gi|2695699728|ref|XM_063755067.1| 29960 g4015 i0 100 0.167597765363128 30 0 17 0 3 32 776 747 PREDICTED: Penaeus indicus uncharacterized LOC134784880 (LOC134784880), partial mRNA blastn 30 56.5 1 Eukaryota Opisthokonta Metazoa Arthropoda Malacostraca Decapoda Penaeidae Penaeus Penaeus indicus
5721541 5721541 PRJNA642647_P_NODE_5625_length_160_cov_3.609756_g5575_i0 PRJNA642647 5625 160 3.609756 5.7756096 Hydrobaenus distinctus 2675304 Arthropoda Arthropoda 206 9.63e-49   NTclustered gi|2490581703|gb|OQ834327.1| 2675304 g5575 i0 91.083 99.65625 157 7 98 5 3 158 2042 1892 Hydrobaenus distinctus isolate 44 HYD-GTS1D8-1 internal transcribed spacer 2 and large subunit ribosomal RNA gene, partial sequence blastn 15945 206 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Diptera Chironomidae Hydrobaenus Hydrobaenus distinctus
8271292 8271292 PRJNA642647_P_NODE_4727_length_168_cov_1.618321_g4677_i0 PRJNA642647 4727 168 1.618321 2.71877928 Daphnia galeata 27404 Arthropoda Arthropoda 287 3.55e-73   NTclustered gi|3249663|gb|AF070497.1|AF070497 27404 g4677 i0 97.633 66.8690476190476 169 1 99 1 3 168 105 273 Daphnia galeata small subunit ribosomal RNA gene, partial sequence blastn 11234 287 1 Eukaryota Opisthokonta Metazoa Arthropoda Branchiopoda Diplostraca Daphniidae Daphnia Daphnia galeata
8271321 8271321 PRJNA642647_P_NODE_967_length_359_cov_3.937888_g917_i0 PRJNA642647 967 359 3.937888 14.13701792 Paracortinidae sp. B QY-2009 595192 Arthropoda Arthropoda 87.9 9.32e-13   NTclustered gi|222875983|gb|FJ605298.1| 595192 g917 i0 76.744 31.033426183844 172 28 46 11 196 359 3479 3312 Paracortinidae sp. B QY-2009 28S ribosomal RNA gene, partial sequence blastn 11141 87.9 1 Eukaryota Opisthokonta Metazoa Arthropoda Diplopoda Callipodida Paracortinidae   Paracortinidae sp. B QY-2009
10087071 10087071 PRJNA642647_P_NODE_4428_length_172_cov_2.407407_g4378_i0 PRJNA642647 4428 172 2.407407 4.14074004 Insecta 50557 Arthropoda Arthropoda 154 3.84e-33   NTclustered gi|302585238|gb|HM802155.1| 7176 g4378 i0 100 73.6569767441861 83 0 92 0 90 172 359 441 Culex quinquefasciatus isolate 05 MDU 28S ribosomal RNA gene, partial sequence blastn 12669 154 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Diptera Culicidae Culex Culex quinquefasciatus
12637723 12637723 PRJNA642647_P_NODE_2850_length_206_cov_3.384615_g2800_i0 PRJNA642647 2850 206 3.384615 6.9723069 Chironomidae 7149 Arthropoda Arthropoda 370 4.38e-98   NTclustered gi|255760248|gb|GQ371030.1| 333810 g2800 i0 99.507 98.5339805825243 203 1 99 0 1 203 266 64 Chironomidae environmental sample clone Chironomidae13 18S ribosomal RNA gene, partial sequence blastn 20298 370 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Diptera Chironomidae   Chironomidae environmental sample
12637746 12637746 PRJNA642647_P_NODE_5890_length_157_cov_1.700000_g5840_i0 PRJNA642647 5890 157 1.7 2.669 Daphnia 6668 Arthropoda Arthropoda 276 7.06e-70   NTclustered gi|189172079|gb|EU595548.1| 27404 g5840 i0 98.718 99.3630573248408 156 0 98 1 4 157 99 254 Daphnia galeata 28S ribosomal RNA gene, partial sequence; 28S-18S ribosomal RNA intergenic spacer, complete sequence; and 18S ribosomal RNA gene, partial sequence blastn 15600 276 1 Eukaryota Opisthokonta Metazoa Arthropoda Branchiopoda Diplostraca Daphniidae Daphnia Daphnia galeata
20284949 20284949 PRJNA642647_P_NODE_1676_length_268_cov_1.658009_g1626_i0 PRJNA642647 1676 268 1.658009 4.44346412 Daphnia 6668 Arthropoda Arthropoda 472 1.5899999999999999e-128   NTclustered gi|22417209|gb|AF532888.1| 27404 g1626 i0 99.612 96.1716417910448 258 1 96 0 4 261 50 307 Daphnia galeata 28S ribosomal RNA gene, partial sequence blastn 25774 472 1 Eukaryota Opisthokonta Metazoa Arthropoda Branchiopoda Diplostraca Daphniidae Daphnia Daphnia galeata
20284969 20284969 PRJNA642647_P_NODE_4696_length_168_cov_2.801527_g4646_i0 PRJNA642647 4696 168 2.801527 4.70656536 Artemia 6660 Arthropoda Arthropoda 226 7.859999999999997e-55   NTclustered gi|161177|gb|M33097.1|SHRRGBA 6662 g4646 i0 92.121 48.3035714285714 165 3 98 1 1 165 331 177 Artemia sp. 5.8S ribosomal RNA gene, complete sequence blastn 8115 226 1 Eukaryota Opisthokonta Metazoa Arthropoda Branchiopoda Anostraca Artemiidae Artemia Artemia sp.
20284971 20284971 PRJNA642647_P_NODE_5716_length_159_cov_3.081967_g5666_i0 PRJNA642647 5716 159 3.081967 4.90032753 Daphnia 6668 Arthropoda Arthropoda 276 7.18e-70   NTclustered gi|57902419|gb|AY730378.1| 27404 g5666 i0 98.71 95.0691823899371 155 2 97 0 2 156 747 593 Daphnia galeata isolate AK1 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 15116 276 1 Eukaryota Opisthokonta Metazoa Arthropoda Branchiopoda Diplostraca Daphniidae Daphnia Daphnia galeata
21020358 21020358 PRJNA642647_P_NODE_1237_length_315_cov_2.708633_g1187_i0 PRJNA642647 1237 315 2.708633 8.53219395 Paracortinidae sp. B QY-2009 595192 Arthropoda Arthropoda 87.9 8.08e-13   NTclustered gi|222875983|gb|FJ605298.1| 595192 g1187 i0 76.744 35.368253968254 172 28 52 11 152 315 3479 3312 Paracortinidae sp. B QY-2009 28S ribosomal RNA gene, partial sequence blastn 11141 87.9 1 Eukaryota Opisthokonta Metazoa Arthropoda Diplopoda Callipodida Paracortinidae   Paracortinidae sp. B QY-2009
21020392 21020392 PRJNA642647_P_NODE_3837_length_183_cov_1.335616_g3787_i0 PRJNA642647 3837 183 1.335616 2.44417728 Daphnia galeata 27404 Arthropoda Arthropoda 326 8.32e-85   NTclustered gi|22417209|gb|AF532888.1| 27404 g3787 i0 98.907 86.9234972677596 183 1 99 1 2 183 541 723 Daphnia galeata 28S ribosomal RNA gene, partial sequence blastn 15907 326 1 Eukaryota Opisthokonta Metazoa Arthropoda Branchiopoda Diplostraca Daphniidae Daphnia Daphnia galeata
25384934 25384934 PRJNA642647_P_NODE_3440_length_191_cov_1.311688_g3390_i0 PRJNA642647 3440 191 1.311688 2.50532408 Daphnia 6668 Arthropoda Arthropoda 283 5.35e-72   NTclustered gi|48686615|gb|AY630606.1| 247387 g3390 i0 93.401 103.078534031414 197 4 98 7 4 191 226 422 Daphnia pileata 28S ribosomal RNA gene, partial sequence blastn 19688 285 0.992982456140351 Eukaryota Opisthokonta Metazoa Arthropoda Branchiopoda Diplostraca Daphniidae Daphnia Daphnia pileata
31389314 31389314 PRJNA642647_P_NODE_1236_length_315_cov_2.996403_g1186_i0 PRJNA642647 1236 315 2.996403 9.43866945 Metazoa 33208 Arthropoda Arthropoda 45.8 0.00668   NR XP_050359582.1 171585 g1186 i0 28.6 4.22857142857143 91 40 71.4 4 296 72 214 295 XP_050359582.1 myoneurin-like isoform X2 [Nymphalis io] diamond 1332 46.2 0.991341991341991 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Lepidoptera Nymphalidae Nymphalis Nymphalis io

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;