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contig_metadata

10 rows where bioproject = "PRJNA642647", tax_clade = "Opisthokonta" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 10 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 10 ✖

bioproject 1

  • PRJNA642647 · 10 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1894187 1894187 PRJNA642647_P_NODE_2062_length_240_cov_5.729064_g2012_i0 PRJNA642647 2062 240 5.729064 13.7497536 Nais communis 188228 Annelida Annelida 366 6.79e-97   NTclustered gi|1494622621|gb|MK076420.1| 188228 g2012 i0 100 130.916666666667 198 0 83 0 4 201 3422 3619 Nais communis isolate NAIco_IUCB large subunit ribosomal RNA gene, partial sequence blastn 31420 366 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Tubificida Naididae Nais Nais communis
8271260 8271260 PRJNA642647_P_NODE_2507_length_218_cov_2.613260_g2457_i0 PRJNA642647 2507 218 2.61326 5.6969068 Chloeia sp. r EEE-2022 2907852 Annelida Annelida 174 3.94e-39   NTclustered gi|2172937611|gb|OM135245.1| 2907852 g2457 i0 81.364 96.5688073394495 220 35 99 6 1 215 6939 6721 Chloeia sp. r EEE-2022 voucher UCNSCB-6857 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 21052 174 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Eunicida Amphinomidae Chloeia Chloeia sp. r EEE-2022
10087074 10087074 PRJNA642647_P_NODE_4608_length_169_cov_7.174242_g4558_i0 PRJNA642647 4608 169 7.174242 12.12446898 Naididae 2109251 Annelida Annelida 303 3.53e-78   NTclustered gi|1228304355|gb|KY633344.1| 74731 g4558 i0 99.401 98.8224852071006 167 1 99 0 3 169 134 300 Nais barbata voucher SMNH115949 18S ribosomal RNA gene, partial sequence blastn 16701 303 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Tubificida Naididae Nais Nais barbata
10822220 10822220 PRJNA642647_P_NODE_4269_length_175_cov_1.666667_g4219_i0 PRJNA642647 4269 175 1.666667 2.91666725 Chaetogaster fluminis 3232326 Annelida Annelida 313 6.13e-81   NTclustered gi|2769213574|gb|PQ013505.1| 3232326 g4219 i0 99.419 64.4057142857143 172 1 98 0 4 175 587 758 Chaetogaster fluminis isolate 130_MOTU9 large subunit ribosomal RNA gene, partial sequence blastn 11271 313 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Tubificida Naididae Chaetogaster Chaetogaster fluminis
10822221 10822221 PRJNA642647_P_NODE_4329_length_174_cov_1.963504_g4279_i0 PRJNA642647 4329 174 1.963504 3.41649696 Nais communis 188228 Annelida Annelida 316 4.7e-82   NTclustered gi|1494622621|gb|MK076420.1| 188228 g4279 i0 100 26.051724137931 171 0 98 0 1 171 2387 2217 Nais communis isolate NAIco_IUCB large subunit ribosomal RNA gene, partial sequence blastn 4533 316 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Tubificida Naididae Nais Nais communis
13372041 13372041 PRJNA642647_P_NODE_5711_length_159_cov_3.778689_g5661_i0 PRJNA642647 5711 159 3.778689 6.00811551 Nais bretscheri 212330 Annelida Annelida 287 3.32e-73   NTclustered gi|285029429|gb|GQ355447.1| 212330 g5661 i0 99.367 28.8050314465409 158 1 99 0 2 159 559 716 Nais bretscheri 28S ribosomal RNA gene, partial sequence blastn 4580 287 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Tubificida Naididae Nais Nais bretscheri
16461351 16461351 PRJNA642647_P_NODE_4033_length_179_cov_3.323944_g3983_i0 PRJNA642647 4033 179 3.323944 5.94985976 Chaetogaster 74726 Annelida Annelida 305 1.05e-78   NTclustered gi|2769213572|gb|PQ013503.1| 3232326 g3983 i0 98.286 95.5586592178771 175 2 97 1 3 176 239 65 Chaetogaster fluminis isolate 128_MOTU9 large subunit ribosomal RNA gene, partial sequence blastn 17105 305 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Tubificida Naididae Chaetogaster Chaetogaster fluminis
17195954 17195954 PRJNA642647_P_NODE_5914_length_157_cov_0.975000_g5864_i0 PRJNA642647 5914 157 0.975 1.53075 Chaetogaster diaphanus 212246 Annelida Annelida 279 5.46e-71   NTclustered gi|2769213603|gb|PQ013534.1| 212246 g5864 i0 99.351 59.7515923566879 154 1 98 0 4 157 504 657 Chaetogaster diaphanus isolate 183_MOTU7 large subunit ribosomal RNA gene, partial sequence blastn 9381 279 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Tubificida Naididae Chaetogaster Chaetogaster diaphanus
19744877 19744877 PRJNA642647_P_NODE_6536_length_151_cov_2.026316_g6486_i0 PRJNA642647 6536 151 2.026316 3.05973716 Chaetogaster fluminis 3232326 Annelida Annelida 274 2.42e-69   NTclustered gi|2769213572|gb|PQ013503.1| 3232326 g6486 i0 100 83.6953642384106 148 0 98 0 1 148 542 395 Chaetogaster fluminis isolate 128_MOTU9 large subunit ribosomal RNA gene, partial sequence blastn 12638 274 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Tubificida Naididae Chaetogaster Chaetogaster fluminis
23570711 23570711 PRJNA642647_P_NODE_3539_length_188_cov_4.218543_g3489_i0 PRJNA642647 3539 188 4.218543 7.93086084 Aeolosoma sp. THS-2006 397537 Annelida Annelida 303 4.03e-78   NTclustered gi|111559284|gb|DQ790019.1| 397537 g3489 i0 95.767 101.164893617021 189 6 100 2 1 188 2674 2861 Aeolosoma sp. THS-2006 28S large subunit ribosomal RNA gene, partial sequence blastn 19019 303 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Aeolosomatidae Aeolosoma Aeolosoma sp. THS-2006

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;