RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA642647" and tax_clade = "Cruciviruses"

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tax_superkingdom 1

tax_clade 1

  • Cruciviruses · 2 ✖

bioproject 1

  • PRJNA642647 · 2 ✖

analysis 1

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27112720 27112720 PRJNA642647_P_NODE_4562_length_170_cov_2.541353_g4512_i0 PRJNA642647 4562 170 2.541353 4.3203001 Crucivirus-349 2761280 Viruses Viruses 64.7 2.43e-10   NR QMW68814.1 2761280 g4512 i0 48.2 0.988235294117647 56 29 98.8 0 3 170 80 135 QMW68814.1 capsid protein [Crucivirus-349] diamond 168 64.7 1 Viruses Cruciviruses             Crucivirus-349
29860067 29860067 PRJNA642647_P_NODE_371_length_580_cov_4.278085_g323_i0 PRJNA642647 371 580 4.278085 24.812893 Crucivirus sp. 2569971 Viruses Viruses 167 5.1699999999999994e-46   NR QKV51150.1 2569971 g323 i0 47.5 1.02413793103448 198 96 98.8 5 8 580 142 338 QKV51150.1 putative capsid protein [Crucivirus sp.] diamond 594 167 1 Viruses Cruciviruses             Crucivirus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;