contig_metadata
46 rows where bioproject = "PRJNA641991" and tax_phylum = "Pseudomonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 617756 | 617756 | PRJNA641991_S_NODE_12661_length_166_cov_0.871795_g12542_i0 | PRJNA641991 | 12661 | 166 | 0.871795 | 1.4471797 | Vibrio panuliri | 1381081 | Bacteria | Bacteria | 52.8 | 0.014 | NTclustered | gi|1789823082|dbj|AP019654.1| | 1381081 | g12542 | i0 | 100 | 0.168674698795181 | 28 | 0 | 17 | 0 | 75 | 102 | 3196447 | 3196474 | Vibrio panuliri JCM 19500 DNA, chromosome 1, complete sequence | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Vibrionales | Vibrionaceae | Vibrio | Vibrio panuliri | ||
| 617799 | 617799 | PRJNA641991_S_NODE_8661_length_191_cov_1.077465_g8542_i0 | PRJNA641991 | 8661 | 191 | 1.077465 | 2.05795815 | Rheinheimera sp. F8 | 1763998 | Bacteria | Bacteria | 353 | 4.02e-93 | NTclustered | gi|975021511|gb|CP013656.1| | 1763998 | g8542 | i0 | 100 | 498.727748691099 | 191 | 0 | 100 | 0 | 1 | 191 | 417529 | 417339 | Rheinheimera sp. F8 genome | blastn | 95257 | 353 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Chromatiales | Chromatiaceae | Rheinheimera | Rheinheimera sp. F8 | ||
| 3168623 | 3168623 | PRJNA641991_S_NODE_2003_length_369_cov_27.256250_g1884_i0 | PRJNA641991 | 2003 | 369 | 27.25625 | 100.5755625 | Actinobacillus genomosp. 2 | 230709 | Bacteria | Bacteria | 54.7 | 0.01 | NTclustered | gi|2489107107|gb|CP103807.1| | 230709 | g1884 | i0 | 96.97 | 0.0894308943089431 | 33 | 0 | 9 | 1 | 44 | 76 | 1524463 | 1524494 | Actinobacillus genomosp. 2 strain CCUG15571 chromosome, complete genome | blastn | 33 | 54.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pasteurellales | Pasteurellaceae | Actinobacillus | Actinobacillus genomosp. 2 | ||
| 3168644 | 3168644 | PRJNA641991_S_NODE_5963_length_223_cov_1.586207_g5844_i0 | PRJNA641991 | 5963 | 223 | 1.586207 | 3.53724161 | Vogesella sp. XCS3 | 2877939 | Bacteria | Bacteria | 392 | 1.0299999999999999e-104 | NTclustered | gi|2124242701|gb|CP085530.1| | 2877939 | g5844 | i0 | 100 | 402.986547085202 | 212 | 0 | 95 | 0 | 12 | 223 | 77866 | 78077 | Vogesella sp. XCS3 chromosome, complete genome | blastn | 89866 | 392 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Neisseriales | Chromobacteriaceae | Vogesella | Vogesella sp. XCS3 | ||
| 4445465 | 4445465 | PRJNA641991_S_NODE_3584_length_279_cov_1.704348_g3465_i0 | PRJNA641991 | 3584 | 279 | 1.704348 | 4.75513092 | Vogesella sp. XCS3 | 2877939 | Bacteria | Bacteria | 494 | 3.55e-135 | NTclustered | gi|2124242701|gb|CP085530.1| | 2877939 | g3465 | i0 | 98.566 | 464.562724014337 | 279 | 4 | 100 | 0 | 1 | 279 | 78125 | 78403 | Vogesella sp. XCS3 chromosome, complete genome | blastn | 129613 | 494 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Neisseriales | Chromobacteriaceae | Vogesella | Vogesella sp. XCS3 | ||
| 4986758 | 4986758 | PRJNA641991_S_NODE_12044_length_167_cov_0.864407_g11925_i0 | PRJNA641991 | 12044 | 167 | 0.864407 | 1.44355969 | Bacteria | 2 | Bacteria | Bacteria | 309 | 7.53e-80 | NTclustered | gi|2922158564|gb|CP183002.1| | 573 | g11925 | i0 | 100 | 650.035928143713 | 167 | 0 | 100 | 0 | 1 | 167 | 6236266 | 6236100 | Klebsiella pneumoniae strain RKI 380DKa chromosome, complete genome | blastn | 108556 | 309 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Klebsiella | Klebsiella pneumoniae | ||
| 4986767 | 4986767 | PRJNA641991_S_NODE_7224_length_206_cov_0.974522_g7105_i0 | PRJNA641991 | 7224 | 206 | 0.974522 | 2.00751532 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 381 | 2.0199999999999994e-101 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g7105 | i0 | 100 | 100 | 206 | 0 | 100 | 0 | 1 | 206 | 3947298 | 3947503 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 20600 | 381 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 5721295 | 5721295 | PRJNA641991_S_NODE_10525_length_176_cov_1.204724_g10406_i0 | PRJNA641991 | 10525 | 176 | 1.204724 | 2.12031424 | Vibrio metoecus | 1481663 | Bacteria | Bacteria | 326 | 7.92e-85 | NTclustered | gi|2556688018|gb|CP129421.1| | 1481663 | g10406 | i0 | 100 | 21.5340909090909 | 176 | 0 | 100 | 0 | 1 | 176 | 772741 | 772916 | Vibrio metoecus strain ZF102 chromosome 1, complete sequence | blastn | 3790 | 326 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Vibrionales | Vibrionaceae | Vibrio | Vibrio metoecus | ||
| 6262092 | 6262092 | PRJNA641991_S_NODE_7125_length_207_cov_1.291139_g7006_i0 | PRJNA641991 | 7125 | 207 | 1.291139 | 2.67265773 | Chromobacteriaceae | 1499392 | Bacteria | Bacteria | 383 | 5.65e-102 | NTclustered | gi|1272225406|gb|CP024029.1| | 536 | g7006 | i0 | 100 | 455.995169082126 | 207 | 0 | 100 | 0 | 1 | 207 | 400202 | 400408 | Chromobacterium violaceum strain CV1197 chromosome | blastn | 94391 | 383 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Neisseriales | Chromobacteriaceae | Chromobacterium | Chromobacterium violaceum | ||
| 8271026 | 8271026 | PRJNA641991_S_NODE_12007_length_167_cov_0.864407_g11888_i0 | PRJNA641991 | 12007 | 167 | 0.864407 | 1.44355969 | Vogesella sp. XCS3 | 2877939 | Bacteria | Bacteria | 224 | 2.81e-54 | NTclustered | gi|2124242701|gb|CP085530.1| | 2877939 | g11888 | i0 | 91.875 | 1.90419161676647 | 160 | 13 | 96 | 0 | 8 | 167 | 3557013 | 3557172 | Vogesella sp. XCS3 chromosome, complete genome | blastn | 318 | 224 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Neisseriales | Chromobacteriaceae | Vogesella | Vogesella sp. XCS3 | ||
| 8811335 | 8811335 | PRJNA641991_S_NODE_8427_length_193_cov_1.416667_g8308_i0 | PRJNA641991 | 8427 | 193 | 1.416667 | 2.73416731 | Acinetobacter | 469 | Bacteria | Bacteria | 357 | 3.1499999999999996e-94 | NTclustered | gi|2456158263|gb|CP119200.1| | 40214 | g8308 | i0 | 100 | 645.067357512953 | 193 | 0 | 100 | 0 | 1 | 193 | 167630 | 167438 | Acinetobacter johnsonii strain AJ572 chromosome, complete genome | blastn | 124498 | 357 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter johnsonii | ||
| 9546341 | 9546341 | PRJNA641991_P_NODE_1648_length_242_cov_1.611399_g1607_i0 | PRJNA641991 | 1648 | 242 | 1.611399 | 3.89958558 | Gilliamella apicola | 1196095 | Bacteria | Bacteria | 250 | 7.2e-62 | NTclustered | gi|2563321002|gb|CP132380.1| | 1196095 | g1607 | i0 | 85.957 | 83.1239669421488 | 235 | 31 | 97 | 2 | 2 | 235 | 2252831 | 2253064 | Gilliamella apicola strain ESL0178 chromosome, complete genome | blastn | 20116 | 250 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Orbales | Orbaceae | Gilliamella | Gilliamella apicola | ||
| 9546363 | 9546363 | PRJNA641991_S_NODE_14848_length_161_cov_0.910714_g14729_i0 | PRJNA641991 | 14848 | 161 | 0.910714 | 1.46624954 | Aeromonas veronii | 654 | Bacteria | Bacteria | 246 | 5.7199999999999986e-61 | NTclustered | gi|2812557571|emb|OY731347.1| | 654 | g14729 | i0 | 100 | 83.2857142857143 | 133 | 0 | 83 | 0 | 29 | 161 | 1394929 | 1394797 | Aeromonas veronii isolate DC2K genome assembly, chromosome: 1 | blastn | 13409 | 246 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Aeromonadales | Aeromonadaceae | Aeromonas | Aeromonas veronii | ||
| 12097149 | 12097149 | PRJNA641991_P_NODE_3610_length_165_cov_0.879310_g3569_i0 | PRJNA641991 | 3610 | 165 | 0.87931 | 1.4508615 | Pseudomonas sp. KT_2_4 | 3241600 | Bacteria | Bacteria | 305 | 9.59e-79 | NTclustered | gi|2790147918|gb|CP166962.1| | 3241600 | g3569 | i0 | 100 | 97.5515151515151 | 165 | 0 | 100 | 0 | 1 | 165 | 3399595 | 3399759 | Pseudomonas sp. KT_2_4 chromosome, complete genome | blastn | 16096 | 305 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas sp. KT_2_4 | ||
| 12097170 | 12097170 | PRJNA641991_S_NODE_12870_length_165_cov_0.879310_g12751_i0 | PRJNA641991 | 12870 | 165 | 0.87931 | 1.4508615 | Acinetobacter pittii | 48296 | Bacteria | Bacteria | 261 | 2.11e-65 | NTclustered | gi|2665665594|gb|CP135157.1| | 48296 | g12751 | i0 | 95.181 | 6.79393939393939 | 166 | 6 | 100 | 2 | 1 | 165 | 4647 | 4811 | Acinetobacter pittii strain AR3676 plasmid pAR3676_6, complete sequence | blastn | 1121 | 261 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter pittii | ||
| 12637546 | 12637546 | PRJNA641991_S_NODE_1090_length_507_cov_14.115721_g971_i0 | PRJNA641991 | 1090 | 507 | 14.115721 | 71.56670547 | Gammaproteobacteria | 1236 | Bacteria | Bacteria | 859 | 0 | NTclustered | gi|1986197500|gb|CP069713.1| | 562 | g971 | i0 | 97.239 | 103.662721893491 | 507 | 14 | 100 | 0 | 1 | 507 | 42979 | 43485 | Escherichia coli strain EA13 plasmid pTA13-1, complete sequence | blastn | 52557 | 865 | 0.993063583815029 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 13912403 | 13912403 | PRJNA641991_S_NODE_6271_length_218_cov_2.331361_g6152_i0 | PRJNA641991 | 6271 | 218 | 2.331361 | 5.08236698 | Gammaproteobacteria | 1236 | Bacteria | Bacteria | 353 | 4.72e-93 | NTclustered | gi|2890464394|gb|CP177216.1| | 562 | g6152 | i0 | 99.485 | 736.04128440367 | 194 | 1 | 89 | 0 | 1 | 194 | 226036 | 226229 | Escherichia coli strain ECDA0423 chromosome, complete genome | blastn | 160457 | 353 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 15186874 | 15186874 | PRJNA641991_S_NODE_9672_length_182_cov_2.436090_g9553_i0 | PRJNA641991 | 9672 | 182 | 2.43609 | 4.4336838 | root | 1 | Root_unresolved | Root_unresolved | 320 | 3.84e-83 | NTclustered | gi|2842886548|gb|CP171997.1| | 47920 | g9553 | i0 | 98.352 | 323.692307692308 | 182 | 3 | 100 | 0 | 1 | 182 | 2509 | 2328 | Acidovorax delafieldii strain UC81_30 chromosome, complete genome | blastn | 58912 | 320 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Acidovorax | Acidovorax delafieldii | ||
| 19009899 | 19009899 | PRJNA641991_P_NODE_495_length_507_cov_11.275109_g455_i0 | PRJNA641991 | 495 | 507 | 11.275109 | 57.16480263 | Gammaproteobacteria | 1236 | Bacteria | Bacteria | 859 | 0 | NTclustered | gi|1986197500|gb|CP069713.1| | 562 | g455 | i0 | 97.239 | 103.662721893491 | 507 | 14 | 100 | 0 | 1 | 507 | 42979 | 43485 | Escherichia coli strain EA13 plasmid pTA13-1, complete sequence | blastn | 52557 | 865 | 0.993063583815029 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 19009900 | 19009900 | PRJNA641991_S_NODE_1035_length_521_cov_1.819915_g916_i0 | PRJNA641991 | 1035 | 521 | 1.819915 | 9.48175715 | Aeromonas | 642 | Bacteria | Bacteria | 920 | 0 | NTclustered | gi|1897557045|dbj|AP023398.1| | 644 | g916 | i0 | 99.408 | 812.984644913628 | 507 | 3 | 97 | 0 | 15 | 521 | 4244660 | 4245166 | Aeromonas hydrophila KAM330 DNA, complete genome | blastn | 423565 | 920 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Aeromonadales | Aeromonadaceae | Aeromonas | Aeromonas hydrophila | ||
| 19744606 | 19744606 | PRJNA641991_S_NODE_10556_length_176_cov_1.047244_g10437_i0 | PRJNA641991 | 10556 | 176 | 1.047244 | 1.84314944 | Acinetobacter johnsonii | 40214 | Bacteria | Bacteria | 52.8 | 0.015 | NTclustered | gi|2257563109|gb|CP090416.1| | 40214 | g10437 | i0 | 96.875 | 0.181818181818182 | 32 | 0 | 18 | 1 | 2 | 32 | 1817007 | 1816976 | Acinetobacter johnsonii strain ICE_NC chromosome, complete genome | blastn | 32 | 52.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter johnsonii | ||
| 20284801 | 20284801 | PRJNA641991_S_NODE_13936_length_163_cov_0.894737_g13817_i0 | PRJNA641991 | 13936 | 163 | 0.894737 | 1.45842131 | Aeromonas | 642 | Bacteria | Bacteria | 296 | 5.68e-76 | NTclustered | gi|1987851782|gb|CP070210.1| | 654 | g13817 | i0 | 100 | 99.1533742331288 | 160 | 0 | 98 | 0 | 4 | 163 | 647295 | 647136 | Aeromonas veronii strain Colony108 chromosome | blastn | 16162 | 296 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Aeromonadales | Aeromonadaceae | Aeromonas | Aeromonas veronii | ||
| 21560369 | 21560369 | PRJNA641991_S_NODE_13977_length_163_cov_0.894737_g13858_i0 | PRJNA641991 | 13977 | 163 | 0.894737 | 1.45842131 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 302 | 1.22e-77 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g13858 | i0 | 100 | 100 | 163 | 0 | 100 | 0 | 1 | 163 | 3932832 | 3932670 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 16300 | 302 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 21560376 | 21560376 | PRJNA641991_S_NODE_9497_length_184_cov_1.118519_g9378_i0 | PRJNA641991 | 9497 | 184 | 1.118519 | 2.05807496 | Shewanella | 22 | Bacteria | Bacteria | 340 | 2.99e-89 | NTclustered | gi|2067058677|gb|CP078038.1| | 24 | g9378 | i0 | 100 | 771.728260869565 | 184 | 0 | 100 | 0 | 1 | 184 | 44623 | 44806 | Shewanella putrefaciens strain SA70 chromosome, complete genome | blastn | 141998 | 340 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Alteromonadales | Shewanellaceae | Shewanella | Shewanella putrefaciens | ||
| 22294872 | 22294872 | PRJNA641991_S_NODE_1558_length_421_cov_4.024194_g1439_i0 | PRJNA641991 | 1558 | 421 | 4.024194 | 16.94185674 | Vogesella sp. XCS3 | 2877939 | Bacteria | Bacteria | 706 | 0 | NTclustered | gi|2124242701|gb|CP085530.1| | 2877939 | g1439 | i0 | 96.927 | 432.211401425178 | 423 | 9 | 100 | 4 | 1 | 421 | 1283021 | 1283441 | Vogesella sp. XCS3 chromosome, complete genome | blastn | 181961 | 706 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Neisseriales | Chromobacteriaceae | Vogesella | Vogesella sp. XCS3 | ||
| 23570527 | 23570527 | PRJNA641991_S_NODE_9059_length_187_cov_3.355072_g8940_i0 | PRJNA641991 | 9059 | 187 | 3.355072 | 6.27398464 | Pararhizobium sp. IMCC21322 | 3067903 | Bacteria | Bacteria | 128 | 2.59e-25 | NTclustered | gi|2563232836|gb|CP132335.1| | 3067903 | g8940 | i0 | 83.704 | 2.28342245989305 | 135 | 22 | 72 | 0 | 2 | 136 | 899580 | 899714 | Pararhizobium sp. IMCC21322 chromosome, complete genome | blastn | 427 | 128 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Rhizobiaceae | Pararhizobium | Pararhizobium sp. IMCC21322 | ||
| 24844104 | 24844104 | PRJNA641991_S_NODE_14440_length_162_cov_0.876106_g14321_i0 | PRJNA641991 | 14440 | 162 | 0.876106 | 1.41929172 | uncultured Candidatus Branchiomonas sp. | 1985111 | Bacteria | Bacteria | 130 | 6.05e-26 | NTclustered | gi|2501521299|gb|OQ945316.1| | 1985111 | g14321 | i0 | 85.714 | 24.6172839506173 | 126 | 15 | 77 | 3 | 1 | 124 | 419 | 295 | Uncultured Candidatus Branchiomonas sp. clone LS150521_35_C1 23S ribosomal RNA gene, partial sequence | blastn | 3988 | 130 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Candidatus Branchiomonas | uncultured Candidatus Branchiomonas sp. | |||
| 25384783 | 25384783 | PRJNA641991_S_NODE_5260_length_235_cov_1.629032_g5141_i0 | PRJNA641991 | 5260 | 235 | 1.629032 | 3.8282252 | root | 1 | Root_unresolved | Root_unresolved | 431 | 2.3199999999999998e-116 | NTclustered | gi|1934492808|gb|CP059080.1| | 40214 | g5141 | i0 | 100 | 43.2851063829787 | 233 | 0 | 99 | 0 | 3 | 235 | 3395959 | 3396191 | Acinetobacter johnsonii strain E10B chromosome, complete genome | blastn | 10172 | 431 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter johnsonii | ||
| 26828233 | 26828233 | PRJNA641991_P_NODE_3941_length_163_cov_0.894737_g3900_i0 | PRJNA641991 | 3941 | 163 | 0.894737 | 1.45842131 | Vibrio vulnificus | 672 | Bacteria | Bacteria | 41.2 | 0.0145 | NR | WP_263574758.1 | 672 | g3900 | i0 | 63.9 | 8.5398773006135 | 36 | 13 | 66.3 | 0 | 162 | 55 | 5 | 40 | WP_263574758.1 hypothetical protein, partial [Vibrio vulnificus] | diamond | 1392 | 41.6 | 0.990384615384615 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Vibrionales | Vibrionaceae | Vibrio | Vibrio vulnificus | ||
| 27870834 | 27870834 | PRJNA641991_S_NODE_925_length_547_cov_1.648594_g809_i0 | PRJNA641991 | 925 | 547 | 1.648594 | 9.01780918 | Hyphomicrobiales bacterium | 1909294 | Bacteria | Bacteria | 46.6 | 0.0238 | NR | MBV9051098.1 | 1909294 | g809 | i0 | 29.7 | 1.39853747714808 | 138 | 87 | 74 | 3 | 520 | 116 | 193 | 323 | MBV9051098.1 FAD-binding oxidoreductase [Hyphomicrobiales bacterium] | diamond | 765 | 46.6 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Hyphomicrobiales bacterium | ||||
| 28470973 | 28470973 | PRJNA641991_S_NODE_7846_length_198_cov_226.919463_g7727_i0 | PRJNA641991 | 7846 | 198 | 226.919463 | 449.30053674 | Klebsiella pneumoniae | 573 | Bacteria | Bacteria | 114 | 1.78e-30 | NR | WP_416532323.1 | 573 | g7727 | i0 | 96.3 | 0.818181818181818 | 54 | 2 | 81.8 | 0 | 198 | 37 | 91 | 144 | WP_416532323.1 hypothetical protein, partial [Klebsiella pneumoniae] | diamond | 162 | 114 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Klebsiella | Klebsiella pneumoniae | ||
| 28514755 | 28514755 | PRJNA641991_S_NODE_8307_length_194_cov_1.462069_g8188_i0 | PRJNA641991 | 8307 | 194 | 1.462069 | 2.83641386 | Bacteria | 2 | Bacteria | Bacteria | 41.6 | 0.0478 | NR | MBN8520949.1 | 1913988 | g8188 | i0 | 39.5 | 1.32989690721649 | 43 | 26 | 66.5 | 0 | 34 | 162 | 165 | 207 | MBN8520949.1 succinate dehydrogenase iron-sulfur subunit [Alphaproteobacteria bacterium] | diamond | 258 | 41.6 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Alphaproteobacteria bacterium | |||||
| 28786381 | 28786381 | PRJNA641991_S_NODE_4567_length_250_cov_1.592040_g4448_i0 | PRJNA641991 | 4567 | 250 | 1.59204 | 3.9801 | Candidatus Thiodiazotropha taylori | 2792791 | Bacteria | Bacteria | 63.5 | 1.95e-9 | NR | MCG8077976.1 | 2792791 | g4448 | i0 | 42.2 | 3.936 | 83 | 48 | 99.6 | 0 | 2 | 250 | 844 | 926 | MCG8077976.1 DDE-type integrase/transposase/recombinase [Candidatus Thiodiazotropha taylori] | diamond | 984 | 63.5 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Chromatiales | Sedimenticolaceae | Candidatus Thiodiazotropha | Candidatus Thiodiazotropha taylori | ||
| 29102450 | 29102450 | PRJNA641991_S_NODE_4448_length_253_cov_2.215686_g4329_i0 | PRJNA641991 | 4448 | 253 | 2.215686 | 5.60568558 | Endozoicomonas elysicola | 305900 | Bacteria | Bacteria | 42.7 | 0.0408 | NR | WP_020582764.1 | 305900 | g4329 | i0 | 39.1 | 0.818181818181818 | 69 | 36 | 74.7 | 1 | 237 | 49 | 222 | 290 | WP_020582764.1 hypothetical protein [Endozoicomonas elysicola] | diamond | 207 | 42.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Oceanospirillales | Endozoicomonadaceae | Endozoicomonas | Endozoicomonas elysicola | ||
| 29240956 | 29240956 | PRJNA641991_S_NODE_14249_length_162_cov_0.902655_g14130_i0 | PRJNA641991 | 14249 | 162 | 0.902655 | 1.4623011 | Acinetobacter | 469 | Bacteria | Bacteria | 107 | 4.39e-26 | NR | MEG2273630.1 | 472 | g14130 | i0 | 100 | 3.92592592592593 | 53 | 0 | 98.1 | 0 | 160 | 2 | 169 | 221 | MEG2273630.1 hypothetical protein [Acinetobacter sp.] | diamond | 636 | 107 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter sp. | ||
| 30334430 | 30334430 | PRJNA641991_S_NODE_14892_length_161_cov_0.910714_g14773_i0 | PRJNA641991 | 14892 | 161 | 0.910714 | 1.46624954 | Shewanella septentrionalis | 2952223 | Bacteria | Bacteria | 109 | 2.54e-28 | NR | WP_261271577.1 | 2952223 | g14773 | i0 | 94.3 | 0.987577639751553 | 53 | 3 | 98.8 | 0 | 161 | 3 | 118 | 170 | WP_261271577.1 hypothetical protein [Shewanella septentrionalis] | diamond | 159 | 109 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Alteromonadales | Shewanellaceae | Shewanella | Shewanella septentrionalis | ||
| 30820298 | 30820298 | PRJNA641991_S_NODE_3374_length_287_cov_1.500000_g3255_i0 | PRJNA641991 | 3374 | 287 | 1.5 | 4.305 | Kiloniella | 454159 | Bacteria | Bacteria | 87.4 | 1.15e-17 | NR | MBS0558773.1 | 1977087 | g3255 | i0 | 53.8 | 3.53310104529617 | 93 | 43 | 97.2 | 0 | 285 | 7 | 329 | 421 | MBS0558773.1 NADH-quinone oxidoreductase subunit M [Pseudomonadota bacterium] | diamond | 1014 | 88.2 | 0.99092970521542 | Bacteria | Pseudomonadati | Pseudomonadota | Pseudomonadota bacterium | ||||||
| 30902788 | 30902788 | PRJNA641991_S_NODE_5754_length_227_cov_0.955056_g5635_i0 | PRJNA641991 | 5754 | 227 | 0.955056 | 2.16797712 | Methylovirgula sp. | 1978224 | Bacteria | Bacteria | 41.6 | 0.0451 | NR | HEY1736391.1 | 1978224 | g5635 | i0 | 28.4 | 0.977973568281938 | 74 | 53 | 97.8 | 0 | 2 | 223 | 20 | 93 | HEY1736391.1 SRPBCC family protein [Methylovirgula sp.] | diamond | 222 | 41.6 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Beijerinckiaceae | Methylovirgula | Methylovirgula sp. | ||
| 31135857 | 31135857 | PRJNA641991_S_NODE_10415_length_177_cov_1.062500_g10296_i0 | PRJNA641991 | 10415 | 177 | 1.0625 | 1.880625 | Alphaproteobacteria | 28211 | Bacteria | Bacteria | 63.9 | 3.62e-10 | NR | MBO6491012.1 | 2026775 | g10296 | i0 | 55.9 | 12.7627118644068 | 59 | 22 | 100 | 2 | 1 | 177 | 214 | 268 | MBO6491012.1 glycine cleavage system aminomethyltransferase GcvT [Pelagibacteraceae bacterium] | diamond | 2259 | 64.3 | 0.993779160186625 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Candidatus Pelagibacterales | Candidatus Pelagibacteraceae | Pelagibacteraceae bacterium | |||
| 31218314 | 31218314 | PRJNA641991_S_NODE_5795_length_226_cov_1.333333_g5676_i0 | PRJNA641991 | 5795 | 226 | 1.333333 | 3.01333258 | Pseudomonadota bacterium | 1977087 | Bacteria | Bacteria | 42 | 0.0366 | NR | MEO0390848.1 | 1977087 | g5676 | i0 | 33.9 | 0.743362831858407 | 56 | 33 | 69 | 1 | 66 | 221 | 43 | 98 | MEO0390848.1 GNAT family N-acetyltransferase [Pseudomonadota bacterium] | diamond | 168 | 42 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Pseudomonadota bacterium | ||||||
| 31768647 | 31768647 | PRJNA641991_S_NODE_13717_length_163_cov_0.894737_g13598_i0 | PRJNA641991 | 13717 | 163 | 0.894737 | 1.45842131 | Mariluticola | 3064792 | Bacteria | Bacteria | 82.4 | 9.05e-18 | NR | HEY8594805.1 | 2845825 | g13598 | i0 | 77.1 | 3.53374233128834 | 48 | 10 | 88.3 | 1 | 145 | 2 | 43 | 89 | HEY8594805.1 nucleoside deaminase [Devosiaceae bacterium] | diamond | 576 | 83.2 | 0.990384615384615 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Devosiaceae | Devosiaceae bacterium | |||
| 31831747 | 31831747 | PRJNA641991_S_NODE_12037_length_167_cov_0.864407_g11918_i0 | PRJNA641991 | 12037 | 167 | 0.864407 | 1.44355969 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 42.4 | 0.00764 | NR | HSS14100.1 | 1978228 | g11918 | i0 | 47.7 | 8.04790419161677 | 44 | 21 | 75.4 | 1 | 32 | 157 | 14 | 57 | HSS14100.1 class I SAM-dependent methyltransferase [Rhizomicrobium sp.] | diamond | 1344 | 42.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Micropepsales | Micropepsaceae | Rhizomicrobium | Rhizomicrobium sp. | ||
| 32041193 | 32041193 | PRJNA641991_S_NODE_14378_length_162_cov_0.902655_g14259_i0 | PRJNA641991 | 14378 | 162 | 0.902655 | 1.4623011 | Vogesella urethralis | 2592656 | Bacteria | Bacteria | 98.6 | 1.17e-22 | NR | WP_144373153.1 | 2592656 | g14259 | i0 | 100 | 0.851851851851852 | 46 | 0 | 85.2 | 0 | 161 | 24 | 137 | 182 | WP_144373153.1 multidrug efflux MFS transporter MdtH [Vogesella urethralis] | diamond | 138 | 98.6 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Neisseriales | Chromobacteriaceae | Vogesella | Vogesella urethralis | ||
| 32294608 | 32294608 | PRJNA641991_P_NODE_1859_length_226_cov_0.830508_g1818_i0 | PRJNA641991 | 1859 | 226 | 0.830508 | 1.87694808 | Rickettsiales bacterium Ac37b | 1528098 | Bacteria | Bacteria | 63.2 | 1.26e-9 | NR | AIL65752.1 | 1528098 | g1818 | i0 | 75.8 | 0.79646017699115 | 33 | 8 | 43.8 | 0 | 226 | 128 | 221 | 253 | AIL65752.1 Cytochrome c oxidase subunit 2 precursor [Rickettsiales bacterium Ac37b] | diamond | 180 | 63.2 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rickettsiales | Rickettsiales bacterium Ac37b | ||||
| 32420890 | 32420890 | PRJNA641991_S_NODE_13319_length_164_cov_0.886957_g13200_i0 | PRJNA641991 | 13319 | 164 | 0.886957 | 1.45460948 | Aureimonas populi | 1701758 | Bacteria | Bacteria | 66.6 | 3.94e-11 | NR | WP_209735593.1 | 1701758 | g13200 | i0 | 68.2 | 0.804878048780488 | 44 | 13 | 80.5 | 1 | 135 | 4 | 66 | 108 | WP_209735593.1 L,D-transpeptidase family protein [Aureimonas populi] | diamond | 132 | 66.6 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Aurantimonadaceae | Aureimonas | Aureimonas populi | ||
| 32452725 | 32452725 | PRJNA641991_P_NODE_3999_length_162_cov_0.902655_g3958_i0 | PRJNA641991 | 3999 | 162 | 0.902655 | 1.4623011 | Pseudomonas citronellolis | 53408 | Bacteria | Bacteria | 66.2 | 6.11e-11 | NR | KAF1066225.1 | 53408 | g3958 | i0 | 63 | 1.7962962962963 | 46 | 17 | 85.2 | 0 | 162 | 25 | 82 | 127 | KAF1066225.1 MAG: hypothetical protein GAK45_01990 [Pseudomonas citronellolis] | diamond | 291 | 66.2 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas citronellolis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;