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contig_metadata

12 rows where bioproject = "PRJNA641991" and tax_phylum = "Chlorophyta"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chlorophyta · 12 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA641991 · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3168594 3168594 PRJNA641991_P_NODE_2343_length_199_cov_1.053333_g2302_i0 PRJNA641991 2343 199 1.053333 2.09613267 Bathycoccus prasinos 41875 Plants Plants 56.5 0.001   NTclustered gi|612398356|ref|XM_007514636.1| 41875 g2302 i0 100 0.150753768844221 30 0 15 0 24 53 320 349 Bathycoccus prasinos prolyl-tRNA synthetase (Bathy02g02510), partial mRNA blastn 30 56.5 1 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Bathycoccaceae Bathycoccus Bathycoccus prasinos
3168619 3168619 PRJNA641991_S_NODE_14243_length_162_cov_0.902655_g14124_i0 PRJNA641991 14243 162 0.902655 1.4623011 Chlorophyta 3041 Plants Plants 68.2 1.36e-11   NR KAK3257406.1 36881 g14124 i0 69 6.22222222222222 42 13 77.8 0 162 37 557 598 KAK3257406.1 Transmembrane 9 super member 3 [Cymbomonas tetramitiformis] diamond 1008 68.6 0.994169096209913 Eukaryota   Viridiplantae Chlorophyta Pyramimonadophyceae Pyramimonadales Pyramimonadaceae Cymbomonas Cymbomonas tetramitiformis
28704274 28704274 PRJNA641991_P_NODE_1627_length_244_cov_1.830769_g1586_i0 PRJNA641991 1627 244 1.830769 4.46707636 Chlorophyta 3041 Plants Plants 101 5.26e-24   NR YP_008802565.1 141716 g1586 i0 60.5 7.65983606557377 81 32 99.6 0 243 1 101 181 YP_008802565.1 cytochrome c oxidase subunit 3 [Monomastix sp. OKE-1] diamond 1869 102 0.990196078431373 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Monomastigales Monomastigaceae Monomastix Monomastix sp. OKE-1
29146558 29146558 PRJNA641991_S_NODE_12309_length_166_cov_1.743590_g12190_i0 PRJNA641991 12309 166 1.74359 2.8943594 Opisthokonta 33154 Plants Plants 50.1 3.36e-5   NR XP_007509908.1 41875 g12190 i0 45.5 40.7530120481928 55 30 99.4 0 1 165 148 202 XP_007509908.1 40S ribosomal protein S2 [Bathycoccus prasinos] diamond 6765 50.1 1 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Bathycoccaceae Bathycoccus Bathycoccus prasinos
29670283 29670283 PRJNA641991_S_NODE_4350_length_256_cov_1.410628_g4231_i0 PRJNA641991 4350 256 1.410628 3.61120768 Trebouxia sp. C 2796353 Plants Plants 149 8e-43   NR KAL0019246.1 2905654 g4231 i0 83.1 2.91796875 83 14 97.3 0 251 3 1 83 KAL0019246.1 hypothetical protein WJX79_009739 [Trebouxia sp. C0005] diamond 747 149 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. C0005
30820301 30820301 PRJNA641991_S_NODE_7894_length_198_cov_1.449664_g7775_i0 PRJNA641991 7894 198 1.449664 2.87033472 Chlorellaceae 35461 Plants Plants 43.1 0.0152   NR PRW59214.1 3076 g7775 i0 54.3 6.89393939393939 46 14 68.2 2 24 158 489 528 PRW59214.1 NADH:ubiquinone oxidoreductase 76 kDa subunit [Chlorella sorokiniana] diamond 1365 43.5 0.990804597701149 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
30997594 30997594 PRJNA641991_P_NODE_3734_length_164_cov_0.886957_g3693_i0 PRJNA641991 3734 164 0.886957 1.45460948 Ostreococcus lucimarinus CCE99 242159 Plants Plants 52 5.35e-6   NR XP_001417453.1 436017 g3693 i0 50 2.96341463414634 54 27 98.8 0 164 3 85 138 XP_001417453.1 mitochondrial GrpE-like protein [Ostreococcus lucimarinus CCE9901] diamond 486 52 1 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Bathycoccaceae Ostreococcus Ostreococcus sp. 'lucimarinus'
31294213 31294213 PRJNA641991_P_NODE_1575_length_250_cov_1.014925_g1534_i0 PRJNA641991 1575 250 1.014925 2.5373125 Eukaryota 2759 Plants Plants 77.4 2.55e-14   NR PRW45211.1 3076 g1534 i0 47 11.712 83 43 99.6 1 250 2 229 310 PRW45211.1 mitogen-activated kinase 3 [Chlorella sorokiniana] diamond 2928 77.8 0.994858611825193 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
31452570 31452570 PRJNA641991_S_NODE_6596_length_214_cov_1.436364_g6477_i0 PRJNA641991 6596 214 1.436364 3.07381896 Eukaryota 2759 Plants Plants 104 1.53e-26   NR KAK2077587.1 3111 g6477 i0 65.7 42.2102803738318 70 24 98.1 0 213 4 7 76 KAK2077587.1 60S ribosomal protein L21A [Prototheca wickerhamii] diamond 9033 105 0.990476190476191 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Prototheca Prototheca wickerhamii
31547494 31547494 PRJNA641991_P_NODE_3556_length_165_cov_0.879310_g3515_i0 PRJNA641991 3556 165 0.87931 1.4508615 Eukaryota 2759 Plants Plants 109 4.38e-26   NR PRW33236.1 3076 g3515 i0 94.4 61.8545454545455 54 3 98.2 0 2 163 193 246 PRW33236.1 nucleolar GTP-binding isoform A [Chlorella sorokiniana] diamond 10206 110 0.990909090909091 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
31882820 31882820 PRJNA641991_S_NODE_13817_length_163_cov_0.894737_g13698_i0 PRJNA641991 13817 163 0.894737 1.45842131 Coccomyxa subellipsoidea C-169 574566 Plants Plants 67.8 1.86e-11   NR XP_005642775.1 574566 g13698 i0 57.4 0.993865030674847 54 22 99.4 1 163 2 217 269 XP_005642775.1 heat shock protein 70E [Coccomyxa subellipsoidea C-169] diamond 162 67.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
32211736 32211736 PRJNA641991_S_NODE_12798_length_165_cov_1.318966_g12679_i0 PRJNA641991 12798 165 1.318966 2.1762939 Chlorophyta 3041 Plants Plants 80.9 3.73e-17   NR CAD7702270.1 121088 g12679 i0 75.5 4.89090909090909 53 13 96.4 0 163 5 29 81 CAD7702270.1 unnamed protein product [Ostreobium quekettii] diamond 807 80.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Ostreobiaceae Ostreobium Ostreobium quekettii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;