RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA641991", tax_kingdom = "Orthornavirae" and tax_phylum = "Negarnaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Negarnaviricota · 3 ✖

tax_kingdom 1

  • Orthornavirae · 3 ✖

bioproject 1

  • PRJNA641991 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29165697 29165697 PRJNA641991_S_NODE_9229_length_186_cov_1.116788_g9110_i0 PRJNA641991 9229 186 1.116788 2.07722568 Bat paramyxovirus 1300978 Viruses Viruses 45.8 0.00147   NR AQX45758.1 1300978 g9110 i0 41.1 0.903225806451613 56 30 87.1 2 177 16 559 613 AQX45758.1 L protein, partial [Bat paramyxovirus] diamond 168 45.8 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Parajeilongvirus Parajeilongvirus hainanense
29367289 29367289 PRJNA641991_S_NODE_1149_length_493_cov_4.414414_g1030_i0 PRJNA641991 1149 493 4.414414 21.76306102 Jeilongvirus 2560155 Viruses Viruses 46.6 0.0159   NR YP_010799258.1 2486281 g1030 i0 33.3 1.70993914807302 93 57 56 3 479 204 221 309 YP_010799258.1 matrix protein [Feline paramyxovirus 163] diamond 843 46.6 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae   Feline paramyxovirus 163
30966108 30966108 PRJNA641991_S_NODE_494_length_730_cov_2.690162_g404_i0 PRJNA641991 494 730 2.690162 19.6381826 Ferlavirus reptilis 3052205 Viruses Viruses 60.1 2.25e-6   NR QWZ46275.1 3052205 g404 i0 23.4 0.756164383561644 184 138 75.2 2 61 609 376 557 QWZ46275.1 hemagglutinin-neuraminidase [Ferlavirus reptilis] diamond 552 60.1 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Ferlavirus Ferlavirus reptilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;