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contig_metadata

6 rows where bioproject = "PRJNA641991" and tax_clade = "PVC group"

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tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • PVC group · 6 ✖

bioproject 1

  • PRJNA641991 · 6 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28565542 28565542 PRJNA641991_S_NODE_3707_length_275_cov_1.128319_g3588_i0 PRJNA641991 3707 275 1.128319 3.10287725 Verrucomicrobiaceae bacterium 2026800 Bacteria Bacteria 74.3 2.76e-13   NR RYD65414.1 2026800 g3588 i0 75.6 0.490909090909091 45 8 45.8 1 237 112 291 335 RYD65414.1 MAG: hypothetical protein EOP84_31955 [Verrucomicrobiaceae bacterium] diamond 135 74.3 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
29967229 29967229 PRJNA641991_S_NODE_12071_length_167_cov_0.864407_g11952_i0 PRJNA641991 12071 167 0.864407 1.44355969 Opitutia 414999 Bacteria Bacteria 67 2.79e-12   NR MCH2388180.1 2026772 g11952 i0 71.4 5.2814371257485 42 12 75.4 0 167 42 97 138 MCH2388180.1 RidA family protein [Opitutales bacterium] diamond 882 67.4 0.99406528189911 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales     Opitutales bacterium
30429193 30429193 PRJNA641991_S_NODE_8333_length_194_cov_1.172414_g8214_i0 PRJNA641991 8333 194 1.172414 2.27448316 Puniceicoccaceae bacterium 5H 2508868 Bacteria Bacteria 41.6 0.0499   NR KAF0095379.1 2508868 g8214 i0 41.8 0.850515463917526 55 31 85.1 1 10 174 53 106 KAF0095379.1 MAG: transporter-associated protein [Puniceicoccaceae bacterium 5H] diamond 165 41.6 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Puniceicoccales Puniceicoccaceae   Puniceicoccaceae bacterium 5H
30871117 30871117 PRJNA641991_S_NODE_12634_length_166_cov_0.871795_g12515_i0 PRJNA641991 12634 166 0.871795 1.4471797 Lentisphaerota bacterium 1932692 Bacteria Bacteria 70.5 2.18e-12   NR NLX25304.1 1932692 g12515 i0 57.4 0.975903614457831 54 19 97.6 1 163 2 525 574 NLX25304.1 NADH-quinone oxidoreductase subunit NuoF [Lentisphaerota bacterium] diamond 162 70.5 1 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerota bacterium
32104383 32104383 PRJNA641991_S_NODE_14698_length_161_cov_0.910714_g14579_i0 PRJNA641991 14698 161 0.910714 1.46624954 Planctomycetota bacterium 2026780 Bacteria Bacteria 51.2 3.03e-6   NR MCA8981906.1 2026780 g14579 i0 53.2 2.59006211180124 47 21 87.6 1 9 149 85 130 MCA8981906.1 CoA-binding protein [Planctomycetota bacterium] diamond 417 51.2 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
32767803 32767803 PRJNA641991_S_NODE_4800_length_244_cov_2.897436_g4681_i0 PRJNA641991 4800 244 2.897436 7.06974384 uncultured Victivallis sp. 354118 Bacteria Bacteria 42.7 0.0373   NR WP_288610338.1 354118 g4681 i0 31 0.872950819672131 71 49 87.3 0 237 25 124 194 WP_288610338.1 DUF58 domain-containing protein [uncultured Victivallis sp.] diamond 213 42.7 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria Victivallales Victivallaceae Victivallis uncultured Victivallis sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;