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contig_metadata

3 rows where bioproject = "PRJNA641991" and tax_clade = "Bacteria candidate phyla"

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analysis 2

tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA641991 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24110277 24110277 PRJNA641991_P_NODE_2199_length_206_cov_0.859873_g2158_i0 PRJNA641991 2199 206 0.859873 1.77133838 Pseudomonadati 3379134 Bacteria Bacteria 67.6 6.43e-7   NTclustered gi|2518551991|emb|OX638351.1| 265321 g2158 i0 83.333 2.66019417475728 78 8 37 5 7 82 499854 499928 MAG: uncultured Poribacteria bacterium isolate d4690918-7cf6-4b6d-bcb0-07eb3c50a363 genome assembly, chromosome: 1 blastn 548 67.6 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         uncultured Poribacteria bacterium
28407752 28407752 PRJNA641991_S_NODE_6386_length_217_cov_1.214286_g6267_i0 PRJNA641991 6386 217 1.214286 2.63500062 Candidatus Dojkabacteria bacterium 2099670 Bacteria Bacteria 58.9 3.93e-9   NR HRN86953.1 2099670 g6267 i0 57.9 0.788018433179724 57 23 78.8 1 47 217 20 75 HRN86953.1 hypothetical protein [Candidatus Dojkabacteria bacterium] diamond 171 58.9 1 Bacteria Bacteria candidate phyla             Candidatus Dojkabacteria bacterium
32673251 32673251 PRJNA641991_S_NODE_12900_length_165_cov_0.879310_g12781_i0 PRJNA641991 12900 165 0.87931 1.4508615 Candidatus Moraniibacteriota bacterium 2045217 Bacteria Bacteria 41.2 0.0472   NR HAI74452.1 2045217 g12781 i0 48.8 0.781818181818182 43 17 78.2 1 153 25 279 316 HAI74452.1 lysine--tRNA ligase [Candidatus Moraniibacteriota bacterium] diamond 129 41.2 1 Bacteria Bacteria candidate phyla   Candidatus Moraniibacteriota         Candidatus Moraniibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;