contig_metadata
5 rows where bioproject = "PRJNA641991", tax_clade = "Amoebozoa" and tax_phylum = "Tubulinea"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3168593 | 3168593 | PRJNA641991_P_NODE_2163_length_207_cov_1.607595_g2122_i0 | PRJNA641991 | 2163 | 207 | 1.607595 | 3.32772165 | Amoeba proteus | 5775 | Tubulinea | other_Eukaryota | 176 | 1.03e-39 | NTclustered | gi|33946362|gb|AY294160.1| | 5775 | g2122 | i0 | 82.828 | 39.8405797101449 | 198 | 32 | 95 | 2 | 2 | 198 | 778 | 974 | Amoeba proteus actin mRNA, complete cds | blastn | 8247 | 176 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Amoebidae | Amoeba | Amoeba proteus | ||
| 9546359 | 9546359 | PRJNA641991_S_NODE_11108_length_172_cov_1.243902_g10989_i0 | PRJNA641991 | 11108 | 172 | 1.243902 | 2.13951144 | Cryptodifflugia operculata | 1078836 | Tubulinea | other_Eukaryota | 200 | 4.87e-47 | NTclustered | gi|345452564|gb|JF694300.1| | 1078836 | g10989 | i0 | 87.791 | 88.1918604651163 | 172 | 19 | 99 | 2 | 2 | 172 | 796 | 626 | Cryptodifflugia operculata clone 4 actin gene, partial cds | blastn | 15169 | 200 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Arcellinida | Cryptodifflugiidae | Cryptodifflugia | Cryptodifflugia operculata | ||
| 16461204 | 16461204 | PRJNA641991_S_NODE_5913_length_224_cov_1.217143_g5794_i0 | PRJNA641991 | 5913 | 224 | 1.217143 | 2.72640032 | Eukaryota | 2759 | unresolved_Eukaryota | other_Eukaryota | 311 | 2.97e-80 | NTclustered | gi|399764267|gb|JQ271778.1| | 1215988 | g5794 | i0 | 98.851 | 35.6205357142857 | 174 | 2 | 78 | 0 | 1 | 174 | 1751 | 1924 | Tubulinea group 02 sp. HF1KJ 18S ribosomal RNA gene, partial sequence | blastn | 7979 | 311 | 1 | Eukaryota | Amoebozoa | Tubulinea | Tubulinea group 02 sp. HF1KJ | ||||||
| 28597263 | 28597263 | PRJNA641991_S_NODE_14727_length_161_cov_0.910714_g14608_i0 | PRJNA641991 | 14727 | 161 | 0.910714 | 1.46624954 | Copromyxa protea | 931554 | Tubulinea | other_Eukaryota | 97.1 | 6.75e-22 | NR | BAN33737.1 | 931554 | g14608 | i0 | 83 | 5.92546583850932 | 53 | 9 | 98.8 | 0 | 159 | 1 | 277 | 329 | BAN33737.1 elongation factor-like protein [Copromyxa protea] | diamond | 954 | 97.1 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Copromyxa | Copromyxa protea | ||
| 31155121 | 31155121 | PRJNA641991_P_NODE_1775_length_232_cov_1.038251_g1734_i0 | PRJNA641991 | 1775 | 232 | 1.038251 | 2.40874232 | Copromyxa protea | 931554 | Tubulinea | other_Eukaryota | 125 | 8.87e-32 | NR | BAN33737.1 | 931554 | g1734 | i0 | 72.7 | 1.97844827586207 | 77 | 21 | 99.6 | 0 | 1 | 231 | 296 | 372 | BAN33737.1 elongation factor-like protein [Copromyxa protea] | diamond | 459 | 125 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Copromyxa | Copromyxa protea |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;