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contig_metadata

15 rows where bioproject = "PRJNA641707" and tax_phylum = "Fornicata"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Fornicata · 15 ✖

tax_clade 1

bioproject 1

  • PRJNA641707 · 15 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
614321 614321 PRJNA641707_P_NODE_255941_length_180_cov_1.206107_g253278_i0 PRJNA641707 255941 180 1.206107 2.1709926 Hexamita inflata 28002 Fornicata other_Eukaryota 302 1.37e-77   NTclustered gi|459348792|gb|KC249997.1| 28002 g253278 i0 97.727 47.0111111111111 176 2 97 2 7 180 2133 2308 Hexamita inflata 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence blastn 8462 302 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Hexamita Hexamita inflata
1892599 1892599 PRJNA641707_P_NODE_40082_length_344_cov_6.403390_g37441_i0 PRJNA641707 40082 344 6.40339 22.0276616 Trepomonas agilis 45002 Fornicata other_Eukaryota 315 3.76e-81   NTclustered gi|2388677|gb|AF015455.1| 45002 g37441 i0 99.422 33.8313953488372 173 1 94 0 172 344 460 632 Trepomonas agilis 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 11638 315 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Trepomonas Trepomonas agilis
13369722 13369722 PRJNA641707_P_NODE_311071_length_161_cov_4.794643_g308408_i0 PRJNA641707 311071 161 4.794643 7.71937523 Trepomonas agilis 45002 Fornicata other_Eukaryota 248 1.59e-61   NTclustered gi|2388677|gb|AF015455.1| 45002 g308408 i0 95.513 0.968944099378882 156 5 96 2 1 155 3091 2937 Trepomonas agilis 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 156 248 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Trepomonas Trepomonas agilis
13371638 13371638 PRJNA641707_P_NODE_93451_length_246_cov_5.167513_g90788_i0 PRJNA641707 93451 246 5.167513 12.71208198 Trepomonas agilis 45002 Fornicata other_Eukaryota 187 5.839999999999998e-43   NTclustered gi|2592099184|gb|OR670380.1| 45002 g90788 i0 100 31.0853658536585 101 0 80 0 146 246 713 813 Trepomonas agilis isolate SOOS4 small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 7647 187 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Trepomonas Trepomonas agilis
19007753 19007753 PRJNA641707_P_NODE_139815_length_242_cov_3.507772_g137152_i0 PRJNA641707 139815 242 3.507772 8.48880824 Enteromonas 460188 Fornicata other_Eukaryota 241 4.33e-59   NTclustered gi|156066408|gb|EF551180.1| 460189 g137152 i0 97.857 60.1198347107438 140 2 57 1 103 241 970 1109 Enteromonas hominis small subunit ribosomal RNA gene, partial sequence blastn 14549 241 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Enteromonas Enteromonas hominis
21019498 21019498 PRJNA641707_P_NODE_70637_length_249_cov_5.265000_g67974_i0 PRJNA641707 70637 249 5.265 13.10985 Trepomonas agilis 45002 Fornicata other_Eukaryota 431 2.4799999999999995e-116   NTclustered gi|2388677|gb|AF015455.1| 45002 g67974 i0 98.765 9.17670682730924 243 2 97 1 8 249 1988 2230 Trepomonas agilis 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 2285 431 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Trepomonas Trepomonas agilis
23564331 23564331 PRJNA641707_P_NODE_141699_length_241_cov_6.682292_g139036_i0 PRJNA641707 141699 241 6.682292 16.10432372 Spironucleus muris 39710 Fornicata other_Eukaryota 187 5.699999999999998e-43   NTclustered gi|157932098|gb|EU043230.1| 39710 g139036 i0 100 2.29875518672199 101 0 81 0 1 101 624 524 Spironucleus muris small subunit ribosomal RNA gene, partial sequence blastn 554 187 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Spironucleus Spironucleus muris
26669392 26669392 PRJNA641707_P_NODE_325941_length_156_cov_2.158879_g323278_i0 PRJNA641707 325941 156 2.158879 3.36785124 Giardia intestinalis 5741 Fornicata other_Eukaryota 43.9 0.00411   NR ESU35215.1 5741 g323278 i0 44.7 0.903846153846154 47 18 80.8 2 139 14 51 94 ESU35215.1 Variant-specific surface protein [Giardia intestinalis] diamond 141 43.9 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia duodenalis
27965447 27965447 PRJNA641707_P_NODE_216105_length_194_cov_6.310345_g213442_i0 PRJNA641707 216105 194 6.310345 12.2420693 Carpediemonas membranifera 201153 Fornicata other_Eukaryota 42.4 0.0257   NR KAG9390649.1 201153 g213442 i0 40 0.850515463917526 55 30 85.1 1 11 175 114 165 KAG9390649.1 Sperm-tail PG-rich repeat [Carpediemonas membranifera] diamond 165 42.4 1 Eukaryota Metamonada   Fornicata       Carpediemonas Carpediemonas membranifera
28533995 28533995 PRJNA641707_P_NODE_147687_length_239_cov_5.842105_g145024_i0 PRJNA641707 147687 239 5.842105 13.96263095 Giardia intestinalis 5741 Fornicata other_Eukaryota 48.9 2.38e-4   NR ESU38684.1 5741 g145024 i0 41.8 0.690376569037657 55 32 69 0 45 209 513 567 ESU38684.1 Variant-specific surface protein, partial [Giardia intestinalis] diamond 165 48.9 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia duodenalis
28691961 28691961 PRJNA641707_P_NODE_276827_length_171_cov_8.836066_g274164_i0 PRJNA641707 276827 171 8.836066 15.10967286 Hexamita inflata 28002 Fornicata other_Eukaryota 54.7 8.42e-7   NR CAK8776862.1 28002 g274164 i0 49.1 0.964912280701754 55 28 96.5 0 5 169 253 307 CAK8776862.1 HINF_068007 [Hexamita inflata] diamond 165 54.7 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Hexamita Hexamita inflata
28723384 28723384 PRJNA641707_P_NODE_257547_length_179_cov_4.376923_g254884_i0 PRJNA641707 257547 179 4.376923 7.83469217 Spironucleus salmonicida 348837 Fornicata other_Eukaryota 48.9 1.05e-4   NR XP_067764259.1 348837 g254884 i0 44.2 0.871508379888268 52 27 85.5 2 25 177 41 91 XP_067764259.1 Sec23 [Spironucleus salmonicida] diamond 156 48.9 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Spironucleus Spironucleus salmonicida
29007895 29007895 PRJNA641707_P_NODE_9128_length_707_cov_12.281155_g7222_i0 PRJNA641707 9128 707 12.281155 86.82776585 Spironucleus salmonicida 348837 Fornicata other_Eukaryota 56.6 3.26e-5   NR XP_067766868.1 348837 g7222 i0 29.5 0.58981612446959 139 80 57.3 6 699 295 474 598 XP_067766868.1 Cysteine-rich membrane protein 2 [Spironucleus salmonicida] diamond 417 56.6 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Spironucleus Spironucleus salmonicida
30554846 30554846 PRJNA641707_P_NODE_190713_length_198_cov_26.986577_g188050_i0 PRJNA641707 190713 198 26.986577 53.43342246 Carpediemonas membranifera 201153 Fornicata other_Eukaryota 55.5 5.87e-7   NR KAG9395968.1 201153 g188050 i0 78.8 1 33 7 50 0 196 98 126 158 KAG9395968.1 Ribosomal protein L10/acidic P0 [Carpediemonas membranifera] diamond 198 55.5 1 Eukaryota Metamonada   Fornicata       Carpediemonas Carpediemonas membranifera
32779949 32779949 PRJNA641707_P_NODE_217820_length_194_cov_2.358621_g215157_i0 PRJNA641707 217820 194 2.358621 4.57572474 root 1 Root_unresolved Root_unresolved 53.1 2.31e-6   NR CAK8757749.1 28002 g215157 i0 47.9 3.55670103092783 48 25 74.2 0 46 189 99 146 CAK8757749.1 HINF_090445 [Hexamita inflata] diamond 690 53.1 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Hexamita Hexamita inflata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;