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contig_metadata

7 rows where bioproject = "PRJNA641707" and tax_phylum = "Deferribacterota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Deferribacterota · 7 ✖

tax_kingdom 1

bioproject 1

  • PRJNA641707 · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1157207 1157207 PRJNA641707_P_NODE_253521_length_181_cov_1.333333_g250858_i0 PRJNA641707 253521 181 1.333333 2.41333273 Flexistipes 2351 Bacteria Bacteria 158 3.1699999999999993e-34   NTclustered gi|470488959|ref|NR_076897.1| 2352 g250858 i0 86.207 88.9060773480663 145 20 80 0 11 155 2024 2168 Flexistipes sinusarabici strain MAS 10 23S ribosomal RNA gene, complete sequence blastn 16092 158 1 Bacteria   Pseudomonadati Deferribacterota Deferribacteres Deferribacterales Flexistipitaceae Flexistipes Flexistipes sinusarabici
6260969 6260969 PRJNA641707_P_NODE_272825_length_173_cov_4.201613_g270162_i0 PRJNA641707 272825 173 4.201613 7.26879049 Mucispirillum 248038 Bacteria Bacteria 313 6.04e-81   NTclustered gi|2211256631|emb|OW091398.1| 248039 g270162 i0 100 210.404624277457 169 0 98 0 5 173 867536 867704 Mucispirillum schaedleri isolate Mucispirillum_schaedleri_DSM104751 genome assembly, chromosome: Mucispirillum_schaedleri_1 blastn 36400 313 1 Bacteria   Pseudomonadati Deferribacterota Deferribacteres Deferribacterales Mucispirillaceae Mucispirillum Mucispirillum schaedleri
12637128 12637128 PRJNA641707_P_NODE_57030_length_283_cov_4.106838_g54369_i0 PRJNA641707 57030 283 4.106838 11.62235154 Mucispirillum 248038 Bacteria Bacteria 189 1.91e-43   NTclustered gi|2211256631|emb|OW091398.1| 248039 g54369 i0 90.78 7.01060070671378 141 13 72 0 1 141 865875 865735 Mucispirillum schaedleri isolate Mucispirillum_schaedleri_DSM104751 genome assembly, chromosome: Mucispirillum_schaedleri_1 blastn 1984 189 1 Bacteria   Pseudomonadati Deferribacterota Deferribacteres Deferribacterales Mucispirillaceae Mucispirillum Mucispirillum schaedleri
19007824 19007824 PRJNA641707_P_NODE_147595_length_239_cov_6.226316_g144932_i0 PRJNA641707 147595 239 6.226316 14.88089524 Mucispirillum 248038 Bacteria Bacteria 172 1.58e-38   NTclustered gi|2211256631|emb|OW091398.1| 248039 g144932 i0 97.98 77.9372384937239 99 2 81 0 1 99 866301 866203 Mucispirillum schaedleri isolate Mucispirillum_schaedleri_DSM104751 genome assembly, chromosome: Mucispirillum_schaedleri_1 blastn 18627 172 1 Bacteria   Pseudomonadati Deferribacterota Deferribacteres Deferribacterales Mucispirillaceae Mucispirillum Mucispirillum schaedleri
21558948 21558948 PRJNA641707_P_NODE_231737_length_189_cov_9.535714_g229074_i0 PRJNA641707 231737 189 9.535714 18.02249946 Mucispirillum 248038 Bacteria Bacteria 303 4.06e-78   NTclustered gi|2211256631|emb|OW091398.1| 248039 g229074 i0 96.216 419.428571428571 185 7 98 0 5 189 865993 866177 Mucispirillum schaedleri isolate Mucispirillum_schaedleri_DSM104751 genome assembly, chromosome: Mucispirillum_schaedleri_1 blastn 79272 303 1 Bacteria   Pseudomonadati Deferribacterota Deferribacteres Deferribacterales Mucispirillaceae Mucispirillum Mucispirillum schaedleri
26777191 26777191 PRJNA641707_P_NODE_237441_length_187_cov_7.231884_g234778_i0 PRJNA641707 237441 187 7.231884 13.52362308 root 1 Root_unresolved Root_unresolved 50.8 2.41e-5   NR WP_265823534.1 46201 g234778 i0 50.9 9.41711229946524 55 27 88.2 0 178 14 276 330 WP_265823534.1 ankyrin repeat domain-containing protein [Geovibrio ferrireducens] diamond 1761 50.8 1 Bacteria   Pseudomonadati Deferribacterota Deferribacteres Deferribacterales Geovibrionaceae Geovibrio Geovibrio ferrireducens
28502357 28502357 PRJNA641707_P_NODE_264447_length_176_cov_6.763780_g261784_i0 PRJNA641707 264447 176 6.76378 11.9042528 Limisalsivibrio acetivorans 1304888 Bacteria Bacteria 51.6 1.08e-6   NR WP_022849798.1 1304888 g261784 i0 73.3 3.06818181818182 30 8 51.1 0 85 174 1 30 WP_022849798.1 30S ribosomal protein S15 [Limisalsivibrio acetivorans] diamond 540 51.6 1 Bacteria   Pseudomonadati Deferribacterota Deferribacteres Deferribacterales Geovibrionaceae Limisalsivibrio Limisalsivibrio acetivorans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;