RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA641707" and tax_phylum = "Candidatus Sumerlaeota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Sumerlaeota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA641707 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1893387 1893387 PRJNA641707_P_NODE_73402_length_247_cov_2.909091_g70739_i0 PRJNA641707 73402 247 2.909091 7.18545477 Candidatus Sumerlaea chitinivorans 2250252 Bacteria Bacteria 148 2.77e-31   NTclustered gi|1419285073|gb|CP030759.1| 2250252 g70739 i0 93.069 94.7692307692308 101 7 41 0 147 247 161138 161238 Candidatus Sumerlaea chitinivorans isolate BY40 chromosome, complete genome blastn 23408 148 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota Candidatus Sumerlaeia Candidatus Sumerlaeales Candidatus Sumerlaeaceae Candidatus Sumerlaea Candidatus Sumerlaea chitinivorans
10818701 10818701 PRJNA641707_P_NODE_264369_length_176_cov_7.078740_g261706_i0 PRJNA641707 264369 176 7.07874 12.4585824 Candidatus Sumerlaea chitinivorans 2250252 Bacteria Bacteria 222 1.0699999999999999e-53   NTclustered gi|1419285073|gb|CP030759.1| 2250252 g261706 i0 90.909 349.857954545455 165 15 94 0 6 170 161835 161671 Candidatus Sumerlaea chitinivorans isolate BY40 chromosome, complete genome blastn 61575 222 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota Candidatus Sumerlaeia Candidatus Sumerlaeales Candidatus Sumerlaeaceae Candidatus Sumerlaea Candidatus Sumerlaea chitinivorans
21017002 21017002 PRJNA641707_P_NODE_269057_length_174_cov_9.784000_g266394_i0 PRJNA641707 269057 174 9.784 17.02416 Candidatus Sumerlaea chitinivorans 2250252 Bacteria Bacteria 137 3.93e-28   NTclustered gi|1419285073|gb|CP030759.1| 2250252 g266394 i0 81.395 139.35632183908 172 28 98 4 4 174 161543 161711 Candidatus Sumerlaea chitinivorans isolate BY40 chromosome, complete genome blastn 24248 137 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota Candidatus Sumerlaeia Candidatus Sumerlaeales Candidatus Sumerlaeaceae Candidatus Sumerlaea Candidatus Sumerlaea chitinivorans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;