RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA641707", tax_kingdom = "Fungi" and tax_phylum = "Olpidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Olpidiomycota · 3 ✖

tax_kingdom 1

  • Fungi · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA641707 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28483149 28483149 PRJNA641707_P_NODE_281466_length_170_cov_1.644628_g278803_i0 PRJNA641707 281466 170 1.644628 2.7958676 Fungi 4751 Fungi Fungi 46.2 7.4e-4   NR KAG5457012.1 278681 g278803 i0 65 2.50588235294118 40 14 70.6 0 168 49 150 189 KAG5457012.1 MAG: ankyrin repeat-containing domain protein [Olpidium bornovanus] diamond 426 46.2 1 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium bornovanus
29525179 29525179 PRJNA641707_P_NODE_314650_length_160_cov_3.054054_g311987_i0 PRJNA641707 314650 160 3.054054 4.8864864 Fungi 4751 Fungi Fungi 74.3 3.83e-14   NR KAG5455935.1 278681 g311987 i0 74.5 5.7375 51 13 95.6 0 153 1 164 214 KAG5455935.1 MAG: prohibitin-1, partial [Olpidium bornovanus] diamond 918 74.3 1 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium bornovanus
32830767 32830767 PRJNA641707_P_NODE_212380_length_195_cov_4.917808_g209717_i0 PRJNA641707 212380 195 4.917808 9.5897256 Olpidium bornovanus 278681 Fungi Fungi 50.4 3.55e-5   NR KAG5459079.1 278681 g209717 i0 68.8 0.984615384615385 32 10 49.2 0 96 191 57 88 KAG5459079.1 MAG: dedicator of cytokinesis-domain-containing protein [Olpidium bornovanus] diamond 192 50.4 1 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium bornovanus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;