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contig_metadata

7 rows where bioproject = "PRJNA641707", tax_clade = "Sar" and tax_phylum = "Foraminifera"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Foraminifera · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA641707 · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4439594 4439594 PRJNA641707_P_NODE_150664_length_236_cov_8.171123_g148001_i0 PRJNA641707 150664 236 8.171123 19.28385028 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 97.4 2.97e-22   NR ETO08371.1 46433 g148001 i0 69.1 27.5466101694915 55 17 69.9 0 165 1 35 89 ETO08371.1 aminotransferase, classes I and II family protein [Reticulomyxa filosa] diamond 6501 97.8 0.995910020449898 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
17194074 17194074 PRJNA641707_P_NODE_336154_length_152_cov_3.737864_g333491_i0 PRJNA641707 336154 152 3.737864 5.68155328 Haynesina germanica 45993 SAR_Eukaryotes SAR_Eukaryotes 134 4.31e-27   NTclustered gi|27734328|gb|AY099116.1| 45993 g333491 i0 83.803 15.25 142 22 93 1 2 142 351 210 Haynesina germanica isolate pub1 polyubiquitin gene, partial cds blastn 2318 134 1 Eukaryota Sar   Foraminifera   Rotaliida Nonionidae Haynesina Haynesina germanica
22291404 22291404 PRJNA641707_P_NODE_256018_length_179_cov_21.876923_g253355_i0 PRJNA641707 256018 179 21.876923 39.15969217 Foraminifera sp. chocolate silver saccamminid 1415197 SAR_Eukaryotes SAR_Eukaryotes 222 1.09e-53   NTclustered gi|745794572|gb|KF728632.1| 1415197 g253355 i0 89.266 61.2067039106145 177 19 99 0 2 178 309 485 Foraminifera sp. chocolate silver saccamminid clone CSS9 actin (act) gene, partial cds blastn 10956 222 1 Eukaryota Sar   Foraminifera         Foraminifera sp. chocolate silver saccamminid
26764526 26764526 PRJNA641707_P_NODE_160981_length_212_cov_4.693252_g158318_i0 PRJNA641707 160981 212 4.693252 9.94969424 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 70.9 3.05e-12   NR ETO01342.1 46433 g158318 i0 47.8 1.95283018867925 69 36 97.6 0 6 212 609 677 ETO01342.1 hypothetical protein RFI_36098 [Reticulomyxa filosa] diamond 414 70.9 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
28028863 28028863 PRJNA641707_P_NODE_34565_length_368_cov_7.103448_g31938_i0 PRJNA641707 34565 368 7.103448 26.14068864 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 94.7 9.04e-20   NR ETO35987.1 46433 g31938 i0 83 0.91304347826087 47 8 38.3 0 279 139 50 96 ETO35987.1 hypothetical protein RFI_01076 [Reticulomyxa filosa] diamond 336 94.7 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
28534107 28534107 PRJNA641707_P_NODE_316207_length_159_cov_5.281818_g313544_i0 PRJNA641707 316207 159 5.281818 8.39809062 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 61.6 2.65e-9   NR ETO06189.1 46433 g313544 i0 63.2 0.716981132075472 38 14 71.7 0 114 1 741 778 ETO06189.1 SAP DNA-binding domain-containing protein, partial [Reticulomyxa filosa] diamond 114 61.6 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
28767224 28767224 PRJNA641707_P_NODE_62487_length_268_cov_8.812785_g59826_i0 PRJNA641707 62487 268 8.812785 23.6182638 Ochromonadales 98652 SAR_Eukaryotes SAR_Eukaryotes 61.6 9.48e-9   NR ETO21460.1 46433 g59826 i0 57.1 3.1455223880597 56 22 62.7 2 168 1 151 204 ETO21460.1 nuclear lim interactor-interacting protein [Reticulomyxa filosa] diamond 843 61.6 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;