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contig_metadata

9 rows where bioproject = "PRJNA641707", tax_clade = "PVC group" and tax_phylum = "Candidatus Omnitrophota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 9 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 9 ✖

bioproject 1

  • PRJNA641707 · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5714764 5714764 PRJNA641707_P_NODE_114965_length_246_cov_2.116751_g112302_i0 PRJNA641707 114965 246 2.116751 5.20720746 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 145 3.56e-30   NTclustered gi|2621701202|emb|OY759724.1| 2035772 g112302 i0 93.75 56.1869918699187 96 6 39 0 6 101 2373721 2373816 MAG: Candidatus Omnitrophota bacterium isolate 1a5844f9-839a-4d7b-a7f9-2444bab12bdd genome assembly, chromosome: 1 blastn 13822 145 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
6995985 6995985 PRJNA641707_P_NODE_87066_length_246_cov_6.279188_g84403_i0 PRJNA641707 87066 246 6.279188 15.44680248 Candidatus Omnitrophica bacterium CG11_big_fil_rev_8_21_14_ 2035772 Bacteria Bacteria 54.3 1.73e-6   NR PIQ85924.1 1974748 g84403 i0 71 0.768292682926829 31 9 37.8 0 95 3 15 45 PIQ85924.1 MAG: peroxiredoxin [Candidatus Omnitrophica bacterium CG11_big_fil_rev_8_21_14_0_20_45_26] diamond 189 54.3 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota       Candidatus Abzuiibacterium Candidatus Abzuiibacterium crystallinum
26828153 26828153 PRJNA641707_P_NODE_277741_length_171_cov_4.901639_g275078_i0 PRJNA641707 277741 171 4.901639 8.38180269 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 42.4 0.0193   NR MCA9406114.1 2035772 g275078 i0 42.9 1.75438596491228 49 26 86 1 164 18 363 409 MCA9406114.1 acyl-CoA dehydrogenase family protein [Candidatus Omnitrophota bacterium] diamond 300 42.4 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
28439317 28439317 PRJNA641707_P_NODE_270366_length_174_cov_4.000000_g267703_i0 PRJNA641707 270366 174 4 6.96 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 95.5 1.21e-21   NR MBN1444831.1 2035772 g267703 i0 75 0.96551724137931 56 14 96.6 0 6 173 37 92 MBN1444831.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 168 95.5 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
29575517 29575517 PRJNA641707_P_NODE_121190_length_245_cov_6.724490_g118527_i0 PRJNA641707 121190 245 6.72449 16.4750005 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 55.5 1.14e-6   NR MBI2167690.1 2035772 g118527 i0 67.7 0.379591836734694 31 10 38 0 150 242 41 71 MBI2167690.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 93 55.5 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
31250212 31250212 PRJNA641707_P_NODE_332955_length_153_cov_4.490385_g330292_i0 PRJNA641707 332955 153 4.490385 6.87028905 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 43.1 0.00568   NR MCX5706781.1 2035772 g330292 i0 61.8 0.666666666666667 34 13 66.7 0 105 4 1 34 MCX5706781.1 translation elongation factor Ts [Candidatus Omnitrophota bacterium] diamond 102 43.1 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
31503438 31503438 PRJNA641707_P_NODE_280316_length_170_cov_4.818182_g277653_i0 PRJNA641707 280316 170 4.818182 8.1909094 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 40 0.0484   NR MBF0511328.1 2035772 g277653 i0 32.7 0.970588235294118 55 36 95.3 1 6 167 36 90 MBF0511328.1 HAD family hydrolase [Candidatus Omnitrophota bacterium] diamond 165 40 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
31566722 31566722 PRJNA641707_P_NODE_202456_length_197_cov_4.405405_g199793_i0 PRJNA641707 202456 197 4.405405 8.67864785 Candidatus Omnitrophica bacterium CG1_ 2035772 Bacteria Bacteria 40.4 0.0469   NR OIO36084.1 1805287 g199793 i0 36.5 0.791878172588833 52 33 79.2 0 196 41 43 94 OIO36084.1 MAG: hypothetical protein AUJ74_03695 [Candidatus Omnitrophica bacterium CG1_02_44_16] diamond 156 40.4 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota       Candidatus Phelpsiimicrobium Candidatus Phelpsiimicrobium noxiivivens
32779960 32779960 PRJNA641707_P_NODE_271920_length_173_cov_7.346774_g269257_i0 PRJNA641707 271920 173 7.346774 12.70991902 Bacteria 2 Bacteria Bacteria 108 6.99e-26   NR OGW82947.1 1801823 g269257 i0 98.2 14.3410404624277 55 1 95.4 0 8 172 199 253 OGW82947.1 MAG: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent [Omnitrophica bacterium RIFCSPHIGHO2_02_FULL_51_18] diamond 2481 108 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Omnitrophica bacterium RIFCSPHIGHO2_02_FULL_51_18

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;