RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA641707" and tax_clade = "Jingmenvirus group"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Jingmenvirus group · 2 ✖

bioproject 1

  • PRJNA641707 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9542013 9542013 PRJNA641707_P_NODE_219588_length_193_cov_7.534722_g216925_i0 PRJNA641707 219588 193 7.534722 14.54201346 Wuhan aphid virus 1 1746067 Viruses Viruses 159 9.529999999999999e-35   NTclustered gi|1817956133|dbj|LC516840.1| 1746067 g216925 i0 95.05 0.523316062176166 101 5 52 0 1 101 132 32 Wuhan aphid virus 1 06BaA3 genomic RNA, segment 2, partial sequence blastn 101 159 1 Viruses Jingmenvirus group Orthornavirae Kitrinoviricota Flasuviricetes Amarillovirales Flaviviridae   Wuhan aphid virus 1
24841122 24841122 PRJNA641707_P_NODE_274620_length_172_cov_6.487805_g271957_i0 PRJNA641707 274620 172 6.487805 11.1590246 Wuhan aphid virus 2 1746068 Viruses Viruses 241 2.87e-59   NTclustered gi|952002246|ref|NC_028387.1| 1746068 g271957 i0 92.771 2.88372093023256 166 12 97 0 1 166 2348 2513 Wuhan aphid virus 2 strain WHYC-2 segment 4, complete sequence blastn 496 241 1 Viruses Jingmenvirus group Orthornavirae Kitrinoviricota Flasuviricetes Amarillovirales Flaviviridae   Wuhan aphid virus 2

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;