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contig_metadata

16 rows where bioproject = "PRJNA641707", tax_clade = "Apusozoa" and tax_superkingdom = "Eukaryota"

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analysis 2

tax_superkingdom 1

  • Eukaryota · 16 ✖

tax_clade 1

  • Apusozoa · 16 ✖

bioproject 1

  • PRJNA641707 · 16 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
615068 615068 PRJNA641707_P_NODE_289181_length_167_cov_4.898305_g286518_i0 PRJNA641707 289181 167 4.898305 8.18016935 Thecamonas trahens 529818 Root_unresolved Root_unresolved 56.5 0.001   NTclustered gi|923122628|ref|XM_013899330.1| 461836 g286518 i0 96.97 0.197604790419162 33 1 20 0 121 153 2572 2540 Thecamonas trahens ATCC 50062 major vault protein (AMSG_09422), mRNA blastn 33 56.5 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
1889524 1889524 PRJNA641707_P_NODE_211562_length_195_cov_6.328767_g208899_i0 PRJNA641707 211562 195 6.328767 12.34109565 Thecamonas trahens 529818 Root_unresolved Root_unresolved 87.9 4.62e-13   NTclustered gi|923128754|ref|XM_013902390.1| 461836 g208899 i0 94.643 0.287179487179487 56 3 29 0 115 170 144 199 Thecamonas trahens ATCC 50062 uncharacterized protein (AMSG_05424), mRNA blastn 56 87.9 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
2432717 2432717 PRJNA641707_P_NODE_305342_length_163_cov_0.912281_g302679_i0 PRJNA641707 305342 163 0.912281 1.48701803 Apusomonadidae 172820 Root_unresolved Root_unresolved 62.1 2.26e-5   NTclustered gi|300078506|gb|GU001168.1| 857050 g302679 i0 100 17.9325153374233 33 0 20 0 126 158 3864 3832 Amastigomonas sp. EEG-2010a 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 2923 62.1 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Amastigomonas Amastigomonas sp. EEG-2010a
6992236 6992236 PRJNA641707_P_NODE_2306_length_1272_cov_111.868357_g1568_i0 PRJNA641707 2306 1272 111.868357 1422.96550104 Podomonas capensis 2925399 Root_unresolved Root_unresolved 174 2.66e-38   NTclustered gi|2206682168|gb|OM966641.1| 2925399 g1568 i0 82.039 16.5778301886792 206 35 16 2 227 432 3705 3908 Podomonas capensis strain SPRINTER small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 21087 174 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Podomonas Podomonas capensis
8265005 8265005 PRJNA641707_P_NODE_14107_length_576_cov_33.358634_g11823_i0 PRJNA641707 14107 576 33.358634 192.14573184 Catacumbia lutetiensis 2925415 Root_unresolved Root_unresolved 158 1.17e-33   NTclustered gi|2206682166|gb|OM966639.1| 2925415 g11823 i0 89.516 19.1423611111111 124 13 22 0 159 282 5301 5178 Catacumbia lutetiensis strain ORSAYFEB19APU2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 11026 158 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Catacumbia Catacumbia lutetiensis
9542581 9542581 PRJNA641707_P_NODE_243808_length_185_cov_2.198529_g241145_i0 PRJNA641707 243808 185 2.198529 4.06727865 Podomonas capensis 2925399 Root_unresolved Root_unresolved 174 3.23e-39   NTclustered gi|2206682168|gb|OM966641.1| 2925399 g241145 i0 84.746 93.5675675675676 177 23 95 4 1 175 4467 4293 Podomonas capensis strain SPRINTER small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 17310 174 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Podomonas Podomonas capensis
10817990 10817990 PRJNA641707_P_NODE_23229_length_452_cov_6.253102_g20669_i0 PRJNA641707 23229 452 6.253102 28.26402104 Catacumbia lutetiensis 2925415 Root_unresolved Root_unresolved 143 2.53e-29   NTclustered gi|2206682166|gb|OM966639.1| 2925415 g20669 i0 79.524 44.1924778761062 210 36 46 7 64 269 4524 4318 Catacumbia lutetiensis strain ORSAYFEB19APU2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 19975 143 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Catacumbia Catacumbia lutetiensis
26669433 26669433 PRJNA641707_P_NODE_89181_length_246_cov_5.868020_g86518_i0 PRJNA641707 89181 246 5.86802 14.4353292 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 43.9 0.01   NR XP_013755759.1 461836 g86518 i0 58.1 0.378048780487805 31 13 37.8 0 97 5 45 75 XP_013755759.1 uncharacterized protein AMSG_08003 [Thecamonas trahens ATCC 50062] diamond 93 43.9 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
26828031 26828031 PRJNA641707_P_NODE_112601_length_246_cov_2.507614_g109938_i0 PRJNA641707 112601 246 2.507614 6.16873044 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 48.5 3.48e-4   NR XP_013762147.1 461836 g109938 i0 65.5 0.353658536585366 29 10 35.4 0 234 148 230 258 XP_013762147.1 AGC protein kinase [Thecamonas trahens ATCC 50062] diamond 87 48.5 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
28249615 28249615 PRJNA641707_P_NODE_329946_length_154_cov_4.828571_g327283_i0 PRJNA641707 329946 154 4.828571 7.43599934 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 53.5 8.34e-7   NR XP_013753563.1 461836 g327283 i0 72.2 0.701298701298701 36 10 70.1 0 46 153 1 36 XP_013753563.1 uncharacterized protein AMSG_10397 [Thecamonas trahens ATCC 50062] diamond 108 53.5 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
28439262 28439262 PRJNA641707_P_NODE_198766_length_197_cov_12.013514_g196103_i0 PRJNA641707 198766 197 12.013514 23.66662258 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 65.5 1.7e-10   NR XP_013759620.1 461836 g196103 i0 67.4 0.654822335025381 43 14 65.5 0 3 131 115 157 XP_013759620.1 uncharacterized protein AMSG_03707 [Thecamonas trahens ATCC 50062] diamond 129 65.5 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
30523457 30523457 PRJNA641707_P_NODE_282033_length_169_cov_9.000000_g279370_i0 PRJNA641707 282033 169 9 15.21 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 57.4 9.45e-8   NR XP_013754176.1 461836 g279370 i0 48 3.42603550295858 50 26 88.8 0 169 20 184 233 XP_013754176.1 ubiquitin carboxyl-terminal hydrolase [Thecamonas trahens ATCC 50062] diamond 579 57.4 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31155011 31155011 PRJNA641707_P_NODE_215115_length_194_cov_8.365517_g212452_i0 PRJNA641707 215115 194 8.365517 16.22910298 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 72 9.27e-13   NR XP_013755007.1 461836 g212452 i0 55.7 4.79381443298969 61 25 94.3 1 186 4 966 1024 XP_013755007.1 uncharacterized protein AMSG_12221 [Thecamonas trahens ATCC 50062] diamond 930 72 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31756260 31756260 PRJNA641707_P_NODE_238457_length_187_cov_3.695652_g235794_i0 PRJNA641707 238457 187 3.695652 6.91086924 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 75.5 4.94e-14   NR XP_013759474.1 461836 g235794 i0 60 1.90909090909091 60 22 96.3 1 6 185 1736 1793 XP_013759474.1 ubiquitin carboxyl-terminal hydrolase 34 [Thecamonas trahens ATCC 50062] diamond 357 75.5 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31863400 31863400 PRJNA641707_P_NODE_311197_length_161_cov_4.464286_g308534_i0 PRJNA641707 311197 161 4.464286 7.18750046 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 47.8 2.07e-4   NR XP_013759822.1 461836 g308534 i0 84 1.45341614906832 25 4 46.6 0 78 4 3 27 XP_013759822.1 actin-like protein 3 [Thecamonas trahens ATCC 50062] diamond 234 48.1 0.993762993762994 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31914534 31914534 PRJNA641707_P_NODE_9277_length_701_cov_28.634969_g7356_i0 PRJNA641707 9277 701 28.634969 200.73113269 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 147 1.27e-36   NR XP_013754710.1 461836 g7356 i0 44.4 0.800285306704708 187 92 76.6 6 652 116 464 646 XP_013754710.1 uncharacterized protein AMSG_09324 [Thecamonas trahens ATCC 50062] diamond 561 147 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;