RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA640350" and tax_phylum = "Ascomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA640350 · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7533675 7533675 PRJNA640350_P_NODE_37666_length_156_cov_1.393701_g37505_i0 PRJNA640350 37666 156 1.393701 2.17417356 root 1 Root_unresolved Root_unresolved 289 9e-74   NTclustered gi|1389182097|gb|CP029160.1| 4932 g37505 i0 100 116.826923076923 156 0 100 0 1 156 3880538 3880383 Saccharomyces cerevisiae strain SY14 chromosome I, complete sequence blastn 18225 289 1 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Saccharomycetales Saccharomycetaceae Saccharomyces Saccharomyces cerevisiae
11359091 11359091 PRJNA640350_P_NODE_2449_length_569_cov_3.481481_g2321_i0 PRJNA640350 2449 569 3.481481 19.80962689 Chaetomiaceae 35718 Fungi Fungi 424 1.03e-113   NTclustered gi|1473249689|gb|MH862633.1| 79813 g2321 i0 100 68.219683655536 229 0 73 0 338 566 866 638 Achaetomium macrosporum culture CBS:152.97 strain CBS 152.97 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 38817 424 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Sordariales Chaetomiaceae Achaetomium Achaetomium macrosporum
16458592 16458592 PRJNA640350_P_NODE_6113_length_392_cov_2.016529_g5954_i0 PRJNA640350 6113 392 2.016529 7.90479368 Sordariales 5139 Fungi Fungi 207 7.56e-49   NTclustered gi|31581142|gb|AF399820.1| 5141 g5954 i0 99.13 59.5127551020408 115 1 53 0 278 392 244 358 Neurospora crassa 26S ribosomal RNA gene, partial sequence blastn 23329 207 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Sordariales Sordariaceae Neurospora Neurospora crassa
24107754 24107754 PRJNA640350_P_NODE_9559_length_351_cov_1.829193_g9398_i0 PRJNA640350 9559 351 1.829193 6.42046743 Sordariomycetes 147550 Fungi Fungi 309 1.7800000000000002e-79   NTclustered gi|780956646|gb|KM096283.1| 5150 g9398 i0 100 58.1253561253561 167 0 64 0 185 351 173 339 Chaetomium elatum strain MF467 18S ribosomal RNA gene, partial sequence blastn 20402 311 0.993569131832797 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Sordariales Chaetomiaceae Chaetomium Chaetomium elatum
26732485 26732485 PRJNA640350_P_NODE_32121_length_167_cov_1.840580_g31960_i0 PRJNA640350 32121 167 1.84058 3.0737686 Metschnikowia pulcherrima 27326 Fungi Fungi 102 5.840000000000001e-26   NR KAJ8135208.1 27326 g31960 i0 94.5 1.97604790419162 55 3 98.8 0 3 167 95 149 KAJ8135208.1 hypothetical protein OY671_011579, partial [Metschnikowia pulcherrima] diamond 330 102 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Metschnikowiaceae Metschnikowia Metschnikowia pulcherrima
27460395 27460395 PRJNA640350_P_NODE_24463_length_193_cov_1.646341_g24302_i0 PRJNA640350 24463 193 1.646341 3.17743813 Ophiobolus disseminans 1469910 Fungi Fungi 43.9 0.00753   NR KAF2826520.1 1469910 g24302 i0 39.3 1.83419689119171 61 32 94.8 2 189 7 285 340 KAF2826520.1 hypothetical protein CC86DRAFT_394454 [Ophiobolus disseminans] diamond 354 43.9 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Phaeosphaeriaceae Ophiobolus Ophiobolus disseminans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;