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contig_metadata

10 rows where bioproject = "PRJNA640143" and tax_phylum = "Ignavibacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 10 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA640143 · 10 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8263152 8263152 PRJNA640143_S_NODE_22267_length_186_cov_130.852349_g22057_i0 PRJNA640143 22267 186 130.852349 243.38536914 Ignavibacteriota bacterium 2026749 Bacteria Bacteria 165 1.96e-36   NTclustered gi|1850842921|gb|CP053447.1| 2026749 g22057 i0 86.577 1.61827956989247 149 20 80 0 1 149 2024700 2024848 Ignavibacteriae bacterium isolate IGN3 chromosome blastn 301 165 1 Bacteria FCB group Pseudomonadati Ignavibacteriota         Ignavibacteriota bacterium
19736524 19736524 PRJNA640143_S_NODE_17376_length_210_cov_1.988439_g17166_i0 PRJNA640143 17376 210 1.988439 4.1757219 Stygiobacter 3081214 Bacteria Bacteria 119 1.33e-30   NR WP_321534385.1 3032292 g17166 i0 95.4 2.8 65 3 92.9 0 3 197 232 296 WP_321534385.1 succinate--CoA ligase subunit alpha [Stygiobacter electus] diamond 588 119 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Melioribacteraceae Stygiobacter Stygiobacter electus
23562836 23562836 PRJNA640143_S_NODE_6859_length_320_cov_69.812721_g6649_i0 PRJNA640143 6859 320 69.812721 223.4007072 Ignavibacteriota bacterium 2026749 Bacteria Bacteria 409 1.55e-109   NTclustered gi|1850842921|gb|CP053447.1| 2026749 g6649 i0 92.606 0.8875 284 21 89 0 37 320 477630 477913 Ignavibacteriae bacterium isolate IGN3 chromosome blastn 284 409 1 Bacteria FCB group Pseudomonadati Ignavibacteriota         Ignavibacteriota bacterium
27302389 27302389 PRJNA640143_S_NODE_14463_length_229_cov_2.234375_g14253_i0 PRJNA640143 14463 229 2.234375 5.11671875 Ignavibacterium sp. 2651167 Bacteria Bacteria 130 4.2999999999999996e-33   NR MCL6494621.1 2651167 g14253 i0 96.1 0.995633187772926 76 3 99.6 0 229 2 423 498 MCL6494621.1 HAMP domain-containing protein [Ignavibacterium sp.] diamond 228 130 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae Ignavibacterium Ignavibacterium sp.
28754775 28754775 PRJNA640143_S_NODE_28747_length_162_cov_2.496000_g28537_i0 PRJNA640143 28747 162 2.496 4.04352 Ignavibacterium sp. 2651167 Bacteria Bacteria 69.7 1.46e-12   NR MBE0551719.1 2651167 g28537 i0 75.5 0.981481481481482 53 13 98.1 0 159 1 161 213 MBE0551719.1 succinate--CoA ligase subunit alpha [Ignavibacterium sp.] diamond 159 69.7 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae Ignavibacterium Ignavibacterium sp.
29417702 29417702 PRJNA640143_S_NODE_32529_length_151_cov_1.105263_g32319_i0 PRJNA640143 32529 151 1.105263 1.66894713 Ignavibacteriales bacterium 2049428 Bacteria Bacteria 84 5.15e-18   NR HOP49173.1 2049428 g32319 i0 100 0.834437086092715 42 0 83.4 0 26 151 65 106 HOP49173.1 outer membrane protein assembly factor BamD [Ignavibacteriales bacterium] diamond 126 84 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales     Ignavibacteriales bacterium
31661104 31661104 PRJNA640143_S_NODE_19557_length_198_cov_7.708075_g19347_i0 PRJNA640143 19557 198 7.708075 15.2619885 Ignavibacterium sp. 2651167 Bacteria Bacteria 103 5.89e-24   NR MCL6494621.1 2651167 g19347 i0 96.3 0.818181818181818 54 2 81.8 0 1 162 490 543 MCL6494621.1 HAMP domain-containing protein [Ignavibacterium sp.] diamond 162 103 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae Ignavibacterium Ignavibacterium sp.
31926750 31926750 PRJNA640143_S_NODE_32157_length_152_cov_1.234783_g31947_i0 PRJNA640143 32157 152 1.234783 1.87687016 Ignavibacterium 795750 Bacteria Bacteria 66.6 1.64e-12   NR QKJ98351.1 2026749 g31947 i0 73 2.92105263157895 37 10 73 0 15 125 49 85 QKJ98351.1 MAG: hypothetical protein HND40_01605 [Ignavibacteriota bacterium] diamond 444 66.6 1 Bacteria FCB group Pseudomonadati Ignavibacteriota         Ignavibacteriota bacterium
32040942 32040942 PRJNA640143_S_NODE_10938_length_261_cov_2.026786_g10728_i0 PRJNA640143 10938 261 2.026786 5.28991146 Ignavibacteriales bacterium 2049428 Bacteria Bacteria 142 3.75e-42   NR HOP51021.1 2049428 g10728 i0 98.6 0.850574712643678 74 1 85.1 0 39 260 1 74 HOP51021.1 Trp family transcriptional regulator [Ignavibacteriales bacterium] diamond 222 142 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales     Ignavibacteriales bacterium
32357566 32357566 PRJNA640143_S_NODE_16419_length_215_cov_6.589888_g16209_i0 PRJNA640143 16419 215 6.589888 14.1682592 Ignavibacteria bacterium 2053306 Bacteria Bacteria 126 5.78e-33   NR MBK7987666.1 2053306 g16209 i0 100 0.851162790697674 61 0 85.1 0 33 215 98 158 MBK7987666.1 acyl-CoA dehydrogenase family protein [Ignavibacteria bacterium] diamond 183 126 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;