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contig_metadata

12 rows where bioproject = "PRJNA640143", tax_kingdom = "Pseudomonadati" and tax_phylum = "Myxococcota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Myxococcota · 12 ✖

tax_kingdom 1

  • Pseudomonadati · 12 ✖

bioproject 1

  • PRJNA640143 · 12 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
609609 609609 PRJNA640143_S_NODE_11861_length_251_cov_12.836449_g11651_i0 PRJNA640143 11861 251 12.836449 32.21948699 Labilithrix luteola 1391654 Bacteria Bacteria 281 2.66e-71   NTclustered gi|913610804|gb|CP012333.1| 1391654 g11651 i0 90 197.362549800797 220 18 87 2 1 218 7089179 7088962 Labilithrix luteola strain DSM 27648, complete genome blastn 49538 281 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix luteola
13909336 13909336 PRJNA640143_S_NODE_16951_length_212_cov_5.097143_g16741_i0 PRJNA640143 16951 212 5.097143 10.80594316 Myxococcia 32015 Bacteria Bacteria 165 2.29e-36   NTclustered gi|913610804|gb|CP012333.1| 1391654 g16741 i0 83.516 76.7216981132076 182 25 84 3 34 212 3941790 3941969 Labilithrix luteola strain DSM 27648, complete genome blastn 16265 165 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix luteola
22286721 22286721 PRJNA640143_S_NODE_11618_length_254_cov_1.764977_g11408_i0 PRJNA640143 11618 254 1.764977 4.48304158 Labilithrix luteola 1391654 Bacteria Bacteria 403 5.53e-108   NTclustered gi|913610804|gb|CP012333.1| 1391654 g11408 i0 95.276 143.484251968504 254 12 100 0 1 254 7089451 7089198 Labilithrix luteola strain DSM 27648, complete genome blastn 36445 403 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix luteola
27302396 27302396 PRJNA640143_S_NODE_2943_length_462_cov_1.623529_g2755_i0 PRJNA640143 2943 462 1.623529 7.50070398 Myxococcales bacterium 2026763 Bacteria Bacteria 48.1 0.0049   NR MBI3182495.1 2026763 g2755 i0 39.7 0.376623376623377 58 35 37.7 0 31 204 993 1050 MBI3182495.1 hypothetical protein [Myxococcales bacterium] diamond 174 48.1 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
28186200 28186200 PRJNA640143_S_NODE_9746_length_275_cov_51.777311_g9536_i0 PRJNA640143 9746 275 51.777311 142.38760525 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 52 3.1e-5   NR MCX5876336.1 2026735 g9536 i0 35.4 0.861818181818182 79 49 84 2 231 1 142 220 MCX5876336.1 AAA domain-containing protein [Deltaproteobacteria bacterium] diamond 237 52 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
29051594 29051594 PRJNA640143_S_NODE_30228_length_157_cov_2.716667_g30018_i0 PRJNA640143 30228 157 2.716667 4.26516719 Pseudomonadati 3379134 Bacteria Bacteria 55.1 5.16e-7   NR MBW2466913.1 2026735 g30018 i0 66.7 1.35668789808917 36 12 68.8 0 35 142 457 492 MBW2466913.1 GAF domain-containing protein [Deltaproteobacteria bacterium] diamond 213 55.1 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
30681105 30681105 PRJNA640143_S_NODE_5573_length_351_cov_3.238854_g5363_i0 PRJNA640143 5573 351 3.238854 11.36837754 Polyangiaceae bacterium 2268199 Bacteria Bacteria 53.1 2.79e-5   NR HEX4516707.1 2268199 g5363 i0 66.7 0.256410256410256 30 10 25.6 0 238 327 421 450 HEX4516707.1 glycoside hydrolase family 43 protein [Polyangiaceae bacterium] diamond 90 53.1 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
30776218 30776218 PRJNA640143_S_NODE_14894_length_226_cov_1.719577_g14684_i0 PRJNA640143 14894 226 1.719577 3.88624402 Myxococcales bacterium 2026763 Bacteria Bacteria 78.6 7.08e-15   NR MSP61786.1 2026763 g14684 i0 63.3 0.650442477876106 49 18 65 0 32 178 380 428 MSP61786.1 argininosuccinate lyase [Myxococcales bacterium] diamond 147 78.6 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
32135936 32135936 PRJNA640143_S_NODE_23478_length_182_cov_1.441379_g23268_i0 PRJNA640143 23478 182 1.441379 2.62330978 Myxococcota bacterium 2818507 Bacteria Bacteria 57.4 1.12e-7   NR HXW60618.1 2818507 g23268 i0 50.8 0.972527472527473 59 29 97.3 0 182 6 433 491 HXW60618.1 methylmalonyl-CoA mutase family protein [Myxococcota bacterium] diamond 177 57.4 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
32388933 32388933 PRJNA640143_S_NODE_24039_length_180_cov_1.363636_g23829_i0 PRJNA640143 24039 180 1.363636 2.4545448 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 58.9 3.05e-8   NR MBK6921759.1 2026735 g23829 i0 49.1 3.6 57 28 95 1 8 178 496 551 MBK6921759.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 648 58.9 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
32830684 32830684 PRJNA640143_S_NODE_23740_length_181_cov_1.625000_g23530_i0 PRJNA640143 23740 181 1.625 2.94125 Myxococcales bacterium 2026763 Bacteria Bacteria 73.6 1.58e-13   NR GMV42498.1 2026763 g23530 i0 59.3 16.1602209944751 59 24 97.8 0 181 5 281 339 GMV42498.1 MAG: hypothetical protein AMXMBFR64_42140 [Myxococcales bacterium] diamond 2925 73.6 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
32893469 32893469 PRJNA640143_S_NODE_6440_length_329_cov_4.181507_g6230_i0 PRJNA640143 6440 329 4.181507 13.75715803 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 90.9 1.75e-19   NR MBK8241707.1 2026735 g6230 i0 51.3 0.711246200607903 78 38 71.1 0 298 65 191 268 MBK8241707.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 234 90.9 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;