RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA640143", tax_kingdom = "Metazoa" and tax_phylum = "Tardigrada"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Tardigrada · 3 ✖

tax_kingdom 1

  • Metazoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA640143 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7533194 7533194 PRJNA640143_S_NODE_13386_length_237_cov_24.405000_g13176_i0 PRJNA640143 13386 237 24.405 57.83985 Isohypsibiidae 2562671 Tardigrada other_Eukaryota 324 4.08e-84   NTclustered gi|1596161668|gb|MK675917.1| 2558939 g13176 i0 95.567 85.6075949367089 203 7 85 2 33 234 116 317 Eremobiotus sp. n. 1 PG-2019 voucher Ere.sp.nov. large subunit ribosomal RNA gene, partial sequence blastn 20289 324 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Isohypsibiidae Eremobiotus Eremobiotus sp. n. 1 PG-2019
28912372 28912372 PRJNA640143_S_NODE_6888_length_320_cov_2.427562_g6678_i0 PRJNA640143 6888 320 2.427562 7.7681984 Paramacrobiotus metropolitanus 2943436 Tardigrada other_Eukaryota 88.2 3.82e-19   NR XP_055346689.1 2943436 g6678 i0 80.4 0.43125 46 9 43.1 0 318 181 150 195 XP_055346689.1 translocator protein-like [Paramacrobiotus metropolitanus] diamond 138 88.2 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Macrobiotidae Paramacrobiotus Paramacrobiotus metropolitanus
29039160 29039160 PRJNA640143_S_NODE_11308_length_257_cov_2.386364_g11098_i0 PRJNA640143 11308 257 2.386364 6.13295548 Ramazzottius varieornatus 947166 Tardigrada other_Eukaryota 70.9 7.99e-13   NR GAV07543.1 947166 g11098 i0 89.2 1.29571984435798 37 4 43.2 0 27 137 155 191 GAV07543.1 hypothetical protein RvY_17367 [Ramazzottius varieornatus] diamond 333 70.9 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Ramazzottiidae Ramazzottius Ramazzottius varieornatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;