RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA640143", tax_kingdom = "Metazoa" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 3 ✖

tax_kingdom 1

  • Metazoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA640143 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27428913 27428913 PRJNA640143_S_NODE_20283_length_195_cov_2.569620_g20073_i0 PRJNA640143 20283 195 2.56962 5.010759 Rotaria magnacalcarata 392030 Rotifera other_Eukaryota 63.9 1.48e-11   NR CAF4735400.1 392030 g20073 i0 66.7 1.8 39 12 60 1 79 195 1 38 CAF4735400.1 unnamed protein product, partial [Rotaria magnacalcarata] diamond 351 63.9 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria magnacalcarata
30491807 30491807 PRJNA640143_S_NODE_20133_length_196_cov_1.402516_g19923_i0 PRJNA640143 20133 196 1.402516 2.74893136 Rotaria socialis 392032 Rotifera other_Eukaryota 97.1 1.06e-22   NR CAF3368087.1 392032 g19923 i0 68.8 0.979591836734694 64 20 98 0 196 5 38 101 CAF3368087.1 unnamed protein product [Rotaria socialis] diamond 192 97.1 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria socialis
32357560 32357560 PRJNA640143_S_NODE_1199_length_650_cov_3.732463_g1091_i0 PRJNA640143 1199 650 3.732463 24.2610095 Adineta ricciae 249248 Rotifera other_Eukaryota 76.3 4.59e-12   NR CAF0996691.1 249248 g1091 i0 34.2 3.06 158 83 63.7 6 532 119 581 737 CAF0996691.1 unnamed protein product [Adineta ricciae] diamond 1989 76.3 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;