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contig_metadata

25 rows where bioproject = "PRJNA640143", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 25 ✖

tax_kingdom 1

  • Bacillati · 25 ✖

bioproject 1

  • PRJNA640143 · 25 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
610018 610018 PRJNA640143_S_NODE_29221_length_161_cov_1.258065_g29011_i0 PRJNA640143 29221 161 1.258065 2.02548465 Armatimonadota bacterium 2033014 Bacteria Bacteria 107 8.16e-27   NR MES2464319.1 2033014 g29011 i0 96.2 0.987577639751553 53 2 98.8 0 159 1 42 94 MES2464319.1 dienelactone hydrolase family protein [Armatimonadota bacterium] diamond 159 107 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
1155466 1155466 PRJNA640143_S_NODE_23781_length_181_cov_1.354167_g23571_i0 PRJNA640143 23781 181 1.354167 2.45104227 root 1 Root_unresolved Root_unresolved 99 1.95e-16   NTclustered gi|2240447379|dbj|AP025739.1| 2219043 g23571 i0 91.549 10.4806629834254 71 6 39 0 3 73 595994 595924 Capsulimonas corticalis AX-7 DNA, complete genome blastn 1897 100 0.99 Bacteria   Bacillati Armatimonadota Armatimonadia Capsulimonadales Capsulimonadaceae Capsulimonas Capsulimonas corticalis
2430605 2430605 PRJNA640143_S_NODE_20202_length_195_cov_12.943038_g19992_i0 PRJNA640143 20202 195 12.943038 25.2389241 Fimbriimonas 1005038 Bacteria Bacteria 69.4 1.67e-7   NTclustered gi|663071213|gb|CP007139.1| 661478 g19992 i0 95.455 59.3897435897436 44 1 22 1 1 43 29569 29612 Fimbriimonas ginsengisoli Gsoil 348, complete genome blastn 11581 69.4 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
4437337 4437337 PRJNA640143_S_NODE_11024_length_260_cov_1.825112_g10814_i0 PRJNA640143 11024 260 1.825112 4.7452912 uncultured Armatimonadetes bacterium 157466 Bacteria Bacteria 110 1.39e-19   NTclustered gi|2874253971|emb|OY970296.1| 157466 g10814 i0 80.769 10.7115384615385 156 17 57 9 32 180 4214222 4214073 MAG: uncultured Armatimonadetes bacterium isolate MFD04408.bin.1.1 genome assembly, chromosome: 1 blastn 2785 110 1 Bacteria   Bacillati Armatimonadota         uncultured Armatimonadetes bacterium
8262983 8262983 PRJNA640143_S_NODE_15907_length_219_cov_1.565934_g15697_i0 PRJNA640143 15907 219 1.565934 3.42939546 Fimbriimonas ginsengisoli 1005039 Bacteria Bacteria 219 1.8099999999999993e-52   NTclustered gi|663071213|gb|CP007139.1| 661478 g15697 i0 85.308 4.60730593607306 211 31 96 0 9 219 226820 226610 Fimbriimonas ginsengisoli Gsoil 348, complete genome blastn 1009 219 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
15183969 15183969 PRJNA640143_S_NODE_32772_length_150_cov_1.699115_g32562_i0 PRJNA640143 32772 150 1.699115 2.5486725 Chthonomonas 1077265 Bacteria Bacteria 91.6 2.59e-14   NTclustered gi|526641997|ref|NR_103994.1| 454171 g32562 i0 88.312 1.02666666666667 77 7 51 2 1 76 185 260 Chthonomonas calidirosea strain T49 23S ribosomal RNA gene, complete sequence blastn 154 91.6 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae Chthonomonas Chthonomonas calidirosea
20281918 20281918 PRJNA640143_S_NODE_4976_length_368_cov_35.758308_g4766_i0 PRJNA640143 4976 368 35.758308 131.59057343999999 Fimbriimonas 1005038 Bacteria Bacteria 296 1.46e-75   NTclustered gi|663071213|gb|CP007139.1| 661478 g4766 i0 86.617 190.48097826087 269 34 73 2 67 334 29518 29785 Fimbriimonas ginsengisoli Gsoil 348, complete genome blastn 70097 296 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
26986005 26986005 PRJNA640143_S_NODE_31122_length_155_cov_0.991525_g30912_i0 PRJNA640143 31122 155 0.991525 1.53686375 Armatimonadota bacterium 2033014 Bacteria Bacteria 85.5 9.53e-18   NR MES2465196.1 2033014 g30912 i0 86.3 0.987096774193548 51 7 98.7 0 1 153 470 520 MES2465196.1 methionine--tRNA ligase [Armatimonadota bacterium] diamond 153 85.5 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
27080981 27080981 PRJNA640143_S_NODE_26282_length_172_cov_1.414815_g26072_i0 PRJNA640143 26282 172 1.414815 2.4334818 Armatimonadota bacterium 2033014 Bacteria Bacteria 73.2 9.72e-14   NR MBC8136268.1 2033014 g26072 i0 57.4 3.83720930232558 54 23 94.2 0 169 8 178 231 MBC8136268.1 SDR family oxidoreductase [Armatimonadota bacterium] diamond 660 73.2 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
27112477 27112477 PRJNA640143_S_NODE_17402_length_210_cov_1.578035_g17192_i0 PRJNA640143 17402 210 1.578035 3.3138735 Armatimonadota bacterium 2033014 Bacteria Bacteria 42.7 0.0237   NR MBW3638176.1 2033014 g17192 i0 48.6 0.528571428571429 37 19 52.9 0 100 210 217 253 MBW3638176.1 PHP domain-containing protein [Armatimonadota bacterium] diamond 111 42.7 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
27649787 27649787 PRJNA640143_S_NODE_31224_length_154_cov_2.051282_g31014_i0 PRJNA640143 31224 154 2.051282 3.15897428 Chthonomonadaceae bacterium 2739509 Bacteria Bacteria 40.8 0.0323   NR HLJ57173.1 2739509 g31014 i0 45.2 0.818181818181818 42 23 81.8 0 137 12 41 82 HLJ57173.1 hypothetical protein [Chthonomonadaceae bacterium] diamond 126 40.8 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae   Chthonomonadaceae bacterium
27933861 27933861 PRJNA640143_S_NODE_24065_length_180_cov_1.230769_g23855_i0 PRJNA640143 24065 180 1.230769 2.2153842 Armatimonadaceae bacterium 2933160 Bacteria Bacteria 91.7 1.07e-20   NR HVK04732.1 2933160 g23855 i0 85 1 60 8 100 1 1 180 53 111 HVK04732.1 UMP kinase [Armatimonadaceae bacterium] diamond 180 91.7 1 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae   Armatimonadaceae bacterium
27946327 27946327 PRJNA640143_S_NODE_29725_length_159_cov_1.844262_g29515_i0 PRJNA640143 29725 159 1.844262 2.93237658 Bacteria 2 Bacteria Bacteria 70.9 1.04e-12   NR MDQ3813416.1 2033014 g29515 i0 61.2 1.84905660377358 49 19 92.5 0 149 3 284 332 MDQ3813416.1 tetratricopeptide repeat protein [Armatimonadota bacterium] diamond 294 70.9 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
28565309 28565309 PRJNA640143_S_NODE_7747_length_304_cov_2.112360_g7537_i0 PRJNA640143 7747 304 2.11236 6.4215744 Armatimonadota bacterium 2033014 Bacteria Bacteria 110 1.25e-25   NR MCL6449576.1 2033014 g7537 i0 56.8 0.868421052631579 88 38 86.8 0 11 274 336 423 MCL6449576.1 YfhO family protein [Armatimonadota bacterium] diamond 264 110 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
28691842 28691842 PRJNA640143_S_NODE_31747_length_153_cov_1.413793_g31537_i0 PRJNA640143 31747 153 1.413793 2.16310329 Armatimonadota bacterium 2033014 Bacteria Bacteria 68.6 1.69e-13   NR MES2459938.1 2033014 g31537 i0 94.3 0.686274509803922 35 2 68.6 0 17 121 57 91 MES2459938.1 30S ribosomal protein S15 [Armatimonadota bacterium] diamond 105 68.6 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
29102175 29102175 PRJNA640143_S_NODE_17068_length_212_cov_1.337143_g16858_i0 PRJNA640143 17068 212 1.337143 2.83474316 Armatimonadota bacterium 2033014 Bacteria Bacteria 43.9 0.00589   NR MBW3635311.1 2033014 g16858 i0 87.5 0.707547169811321 24 3 34 0 210 139 143 166 MBW3635311.1 hypothetical protein [Armatimonadota bacterium] diamond 150 43.9 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
30143843 30143843 PRJNA640143_S_NODE_31032_length_155_cov_1.322034_g30822_i0 PRJNA640143 31032 155 1.322034 2.0491527 Chthonomonadaceae bacterium 2739509 Bacteria Bacteria 51.6 8.05e-6   NR HZT42006.1 2739509 g30822 i0 63.9 1.93548387096774 36 13 69.7 0 109 2 99 134 HZT42006.1 hypothetical protein [Chthonomonadaceae bacterium] diamond 300 51.6 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae   Chthonomonadaceae bacterium
30302623 30302623 PRJNA640143_S_NODE_27772_length_166_cov_1.410853_g27562_i0 PRJNA640143 27772 166 1.410853 2.34201598 Armatimonadota bacterium 2033014 Bacteria Bacteria 97.8 3.3e-24   NR MBC8104744.1 2033014 g27562 i0 93.6 1.69879518072289 47 3 84.9 0 164 24 55 101 MBC8104744.1 cytidine/deoxycytidylate deaminase family protein [Armatimonadota bacterium] diamond 282 97.8 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
31060757 31060757 PRJNA640143_S_NODE_25335_length_175_cov_3.847826_g25125_i0 PRJNA640143 25335 175 3.847826 6.7336955 Capsulimonadales bacterium 2971800 Bacteria Bacteria 85.5 2.62e-19   NR MDX1934163.1 2971800 g25125 i0 69.5 2.82857142857143 59 16 97.7 1 175 5 81 139 MDX1934163.1 Hsp20/alpha crystallin family protein [Capsulimonadales bacterium] diamond 495 85.5 1 Bacteria   Bacillati Armatimonadota Armatimonadia Capsulimonadales     Capsulimonadales bacterium
31092066 31092066 PRJNA640143_S_NODE_19175_length_200_cov_4.527607_g18965_i0 PRJNA640143 19175 200 4.527607 9.055214 Armatimonadota bacterium 2033014 Bacteria Bacteria 60.5 8.18e-9   NR MBC8102044.1 2033014 g18965 i0 62.1 0.87 58 20 85.5 2 6 176 213 269 MBC8102044.1 YsnF/AvaK domain-containing protein [Armatimonadota bacterium] diamond 174 60.5 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
31281632 31281632 PRJNA640143_S_NODE_32895_length_150_cov_1.185841_g32685_i0 PRJNA640143 32895 150 1.185841 1.7787615 Armatimonadota bacterium 2033014 Bacteria Bacteria 47 5.42e-5   NR MES2463349.1 2033014 g32685 i0 95.8 0.48 24 1 48 0 77 148 1 24 MES2463349.1 riboflavin synthase [Armatimonadota bacterium] diamond 72 47 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
31692863 31692863 PRJNA640143_S_NODE_32937_length_150_cov_1.035398_g32727_i0 PRJNA640143 32937 150 1.035398 1.553097 Armatimonadota bacterium 2033014 Bacteria Bacteria 76.6 1.01e-14   NR MES2460242.1 2033014 g32727 i0 87.5 0.8 40 5 80 0 31 150 1 40 MES2460242.1 galactokinase [Armatimonadota bacterium] diamond 120 76.6 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
31756153 31756153 PRJNA640143_S_NODE_27937_length_165_cov_1.859375_g27727_i0 PRJNA640143 27937 165 1.859375 3.06796875 Armatimonadota bacterium 2033014 Bacteria Bacteria 60.1 4.78e-9   NR MES2461252.1 2033014 g27727 i0 80.6 0.654545454545455 36 7 65.5 0 165 58 178 213 MES2461252.1 SGNH/GDSL hydrolase family protein [Armatimonadota bacterium] diamond 108 60.1 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
31882581 31882581 PRJNA640143_S_NODE_32577_length_151_cov_1.026316_g32367_i0 PRJNA640143 32577 151 1.026316 1.54973716 Armatimonadaceae bacterium 2933160 Bacteria Bacteria 47.8 1.42e-5   NR HVK05285.1 2933160 g32367 i0 62.9 0.695364238410596 35 13 69.5 0 110 6 31 65 HVK05285.1 hypothetical protein [Armatimonadaceae bacterium] diamond 105 47.8 1 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae   Armatimonadaceae bacterium
32357574 32357574 PRJNA640143_S_NODE_31099_length_155_cov_0.991525_g30889_i0 PRJNA640143 31099 155 0.991525 1.53686375 Armatimonadaceae bacterium 2933160 Bacteria Bacteria 66.6 2.33e-12   NR HVK02690.1 2933160 g30889 i0 81.6 1.50967741935484 38 7 73.5 0 155 42 84 121 HVK02690.1 CbiX/SirB N-terminal domain-containing protein [Armatimonadaceae bacterium] diamond 234 66.6 1 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae   Armatimonadaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;