RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA640143", tax_clade = "Opisthokonta" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 6 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 6 ✖

bioproject 1

  • PRJNA640143 · 6 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27175634 27175634 PRJNA640143_S_NODE_30182_length_158_cov_0.966942_g29972_i0 PRJNA640143 30182 158 0.966942 1.52776836 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 58.9 2.26e-8   NR PJF16831.1 1246581 g29972 i0 56.9 0.968354430379747 51 19 96.8 1 153 1 509 556 PJF16831.1 Sulfhydryl oxidase [Paramicrosporidium saccamoebae] diamond 153 58.9 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae
27713223 27713223 PRJNA640143_S_NODE_16524_length_215_cov_1.314607_g16314_i0 PRJNA640143 16524 215 1.314607 2.82640505 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 123 1.26e-30   NR PJF16831.1 1246581 g16314 i0 85.9 0.990697674418605 71 10 99.1 0 2 214 370 440 PJF16831.1 Sulfhydryl oxidase [Paramicrosporidium saccamoebae] diamond 213 123 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae
28155068 28155068 PRJNA640143_S_NODE_30745_length_156_cov_0.983193_g30535_i0 PRJNA640143 30745 156 0.983193 1.53378108 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 67.8 1.47e-11   NR PJF17204.1 1246581 g30535 i0 64.7 0.980769230769231 51 18 98.1 0 4 156 282 332 PJF17204.1 hypothetical protein PSACC_03008 [Paramicrosporidium saccamoebae] diamond 153 67.8 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae
29733326 29733326 PRJNA640143_S_NODE_27550_length_167_cov_1.200000_g27340_i0 PRJNA640143 27550 167 1.2 2.004 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 64.3 3.25e-10   NR PJF17171.1 1246581 g27340 i0 65.9 0.790419161676647 44 15 79 0 1 132 556 599 PJF17171.1 hypothetical protein PSACC_03011 [Paramicrosporidium saccamoebae] diamond 132 64.3 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae
31408344 31408344 PRJNA640143_S_NODE_32616_length_150_cov_3.522124_g32406_i0 PRJNA640143 32616 150 3.522124 5.283186 Rozella allomycis CSF55 988480 Fungi Fungi 47.8 1.04e-5   NR RKP19416.1 988480 g32406 i0 59.5 2.2 37 15 74 0 132 22 6 42 RKP19416.1 hypothetical protein ROZALSC1DRAFT_14013, partial [Rozella allomycis CSF55] diamond 330 47.8 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
32893466 32893466 PRJNA640143_S_NODE_32540_length_151_cov_1.026316_g32330_i0 PRJNA640143 32540 151 1.026316 1.54973716 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 51.6 7.6e-6   NR PJF17528.1 1246581 g32330 i0 47.8 0.913907284768212 46 24 91.4 0 3 140 486 531 PJF17528.1 hypothetical protein PSACC_02618 [Paramicrosporidium saccamoebae] diamond 138 51.6 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;