RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA640143", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA640143 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26954266 26954266 PRJNA640143_S_NODE_14282_length_230_cov_4.533679_g14072_i0 PRJNA640143 14282 230 4.533679 10.4274617 Minisyncoccota bacterium 2053589 Bacteria Bacteria 57.8 3.16e-8   NR MDD4805060.1 2053589 g14072 i0 38.7 0.808695652173913 62 38 80.9 0 40 225 1 62 MDD4805060.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 186 57.8 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31914331 31914331 PRJNA640143_S_NODE_17197_length_211_cov_2.017241_g16987_i0 PRJNA640143 17197 211 2.017241 4.25637851 Minisyncoccota bacterium 2053589 Bacteria Bacteria 43.5 0.00579   NR MBP9757018.1 2053589 g16987 i0 48.8 0.611374407582938 43 19 61.1 1 80 208 13 52 MBP9757018.1 30S ribosomal protein S12 [Candidatus Paceibacterota bacterium] diamond 129 43.5 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;