RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA640143", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Woeseibacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Woeseibacteriota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA640143 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23562906 23562906 PRJNA640143_S_NODE_9259_length_281_cov_2.922131_g9049_i0 PRJNA640143 9259 281 2.922131 8.21118811 Candidatus Woesebacteria bacterium 2026804 Bacteria Bacteria 128 4.18e-25   NTclustered gi|1958092354|gb|CP065002.1| 2026804 g9049 i0 97.333 1.05338078291815 75 2 27 0 188 262 656226 656152 MAG: Candidatus Woesebacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.182_cln chromosome, complete genome blastn 296 128 1 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium
27630720 27630720 PRJNA640143_S_NODE_6564_length_326_cov_42.114187_g6354_i0 PRJNA640143 6564 326 42.114187 137.29224962 Bacteria 2 Bacteria Bacteria 156 6.59e-44   NR OGM08288.1 1802478 g6354 i0 71.6 1.80368098159509 102 28 92.9 1 310 8 129 230 OGM08288.1 MAG: hypothetical protein A2Z67_01110 [Candidatus Woesebacteria bacterium RBG_13_36_22] diamond 588 157 0.993630573248408 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium RBG_13_36_22
31250015 31250015 PRJNA640143_S_NODE_15955_length_218_cov_15.243094_g15745_i0 PRJNA640143 15955 218 15.243094 33.22994492 Candidatus Woesebacteria bacterium 2026804 Bacteria Bacteria 66.6 1.02e-10   NR HNQ31543.1 2026804 g15745 i0 77.5 0.55045871559633 40 9 55 0 4 123 382 421 HNQ31543.1 hypothetical protein [Candidatus Woesebacteria bacterium] diamond 120 66.6 1 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;