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contig_metadata

27 rows where bioproject = "PRJNA638724" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 27 ✖

bioproject 1

  • PRJNA638724 · 27 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5713213 5713213 PRJNA638724_P_NODE_3065_length_350_cov_3.043321_g2979_i0 PRJNA638724 3065 350 3.043321 10.6516235 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 298 3.85e-76   NTclustered gi|2701272534|gb|OR640980.1| 3003959 g2979 i0 82.883 0.951428571428571 333 55 95 2 1 332 2981 2650 Picornavirales sp. isolate Tuebingen RdRp (ORF1) and capsid protein (ORF2) genes, complete cds blastn 333 298 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
5713217 5713217 PRJNA638724_P_NODE_5325_length_277_cov_1.955882_g5239_i0 PRJNA638724 5325 277 1.955882 5.41779314 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 255 1.81e-63   NTclustered gi|2701272534|gb|OR640980.1| 3003959 g5239 i0 83.895 0.963898916967509 267 43 96 0 1 267 2116 1850 Picornavirales sp. isolate Tuebingen RdRp (ORF1) and capsid protein (ORF2) genes, complete cds blastn 267 255 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
8262829 8262829 PRJNA638724_P_NODE_3627_length_326_cov_2.399209_g3541_i0 PRJNA638724 3627 326 2.399209 7.82142134 brine shrimp partiti-like virus 4 2900391 Viruses Viruses 580 3.1599999999999993e-161   NTclustered gi|2209094893|gb|OL472518.1| 2900391 g3541 i0 99.685 12.659509202454 317 1 97 0 1 317 485 169 MAG: Brine shrimp partiti-like virus 4 isolate GSL/14 RNA-dependent RNA polymerase gene, complete cds blastn 4127 580 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   brine shrimp partiti-like virus 4
8262834 8262834 PRJNA638724_P_NODE_7427_length_242_cov_0.911243_g7341_i0 PRJNA638724 7427 242 0.911243 2.20520806 Caudoviricetes sp. 2832643 Viruses Viruses 342 1.16e-89   NTclustered gi|2914869935|gb|OR222861.1| 2832643 g7341 i0 93.133 8.29338842975207 233 16 96 0 1 233 6244 6476 MAG: Caudoviricetes sp. isolate MSP0489 genomic sequence blastn 2007 342 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
12088991 12088991 PRJNA638724_P_NODE_5650_length_270_cov_1.081218_g5564_i0 PRJNA638724 5650 270 1.081218 2.9192886 Caudoviricetes sp. 2832643 Viruses Viruses 462 9.65e-126   NTclustered gi|2052998103|tpg|BK030969.1| 2832643 g5564 i0 98.473 443.459259259259 262 4 97 0 9 270 23 284 MAG TPA_asm: Caudoviricetes sp. isolate ctdoP9, partial genome blastn 119734 462 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
12088992 12088992 PRJNA638724_P_NODE_6090_length_260_cov_1.957219_g6004_i0 PRJNA638724 6090 260 1.957219 5.0887694 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 311 3.54e-80   NTclustered gi|2701272534|gb|OR640980.1| 3003959 g6004 i0 89.157 0.957692307692308 249 27 96 0 11 259 1142 1390 Picornavirales sp. isolate Tuebingen RdRp (ORF1) and capsid protein (ORF2) genes, complete cds blastn 249 311 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
15912463 15912463 PRJNA638724_P_NODE_3853_length_317_cov_2.536885_g3767_i0 PRJNA638724 3853 317 2.536885 8.04192545 Beihai levi-like virus 25 1922411 Viruses Viruses 350 9.4e-92   NTclustered gi|1110864435|gb|KX883480.1| 1922411 g3767 i0 87.459 0.95583596214511 303 38 96 0 15 317 517 819 Beihai levi-like virus 25 strain BHSC163351 hypothetical protein genes, complete cds blastn 303 350 1 Viruses               Beihai levi-like virus 25
15912472 15912472 PRJNA638724_P_NODE_7493_length_241_cov_1.535714_g7407_i0 PRJNA638724 7493 241 1.535714 3.70107074 Cressdnaviricota sp. 2748378 Viruses Viruses 429 8.58e-116   NTclustered gi|2059635284|tpg|BK028490.1| 2748378 g7407 i0 100 0.962655601659751 232 0 96 0 1 232 863 1094 MAG TPA_asm: Cressdnaviricota sp. isolate ct2xv1, partial genome blastn 232 429 1 Viruses   Shotokuvirae Cressdnaviricota         Cressdnaviricota sp.
19736323 19736323 PRJNA638724_P_NODE_5996_length_262_cov_1.227513_g5910_i0 PRJNA638724 5996 262 1.227513 3.21608406 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 226 1.3299999999999994e-54   NTclustered gi|2701272534|gb|OR640980.1| 3003959 g5910 i0 83.004 0.965648854961832 253 39 96 3 2 253 5041 4792 Picornavirales sp. isolate Tuebingen RdRp (ORF1) and capsid protein (ORF2) genes, complete cds blastn 253 226 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
24835904 24835904 PRJNA638724_P_NODE_7320_length_243_cov_0.941176_g7234_i0 PRJNA638724 7320 243 0.941176 2.28705768 brine shrimp reovirus 1 2900474 Viruses Viruses 431 2.4099999999999995e-116   NTclustered gi|2209095661|gb|OL472736.1| 2900474 g7234 i0 100 19.1152263374486 233 0 96 0 11 243 1353 1585 MAG: Brine shrimp reovirus 1 isolate SC/15 segment 3 hypothetical protein gene, complete cds blastn 4645 431 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales     brine shrimp reovirus 1
26922846 26922846 PRJNA638724_P_NODE_6682_length_250_cov_2.062147_g6596_i0 PRJNA638724 6682 250 2.062147 5.1553675 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 156 5.329999999999998e-42   NR WXH59494.1 3003959 g6596 i0 93.7 0.948 79 5 94.8 0 238 2 847 925 WXH59494.1 RdRp [Picornavirales sp.] diamond 237 156 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
26985989 26985989 PRJNA638724_P_NODE_4762_length_290_cov_1.958525_g4676_i0 PRJNA638724 4762 290 1.958525 5.6797225 Cressdnaviricota sp. 2748378 Viruses Viruses 67.4 1.08e-10   NR UOF82937.1 2748378 g4676 i0 57.1 0.579310344827586 56 24 57.9 0 1 168 257 312 UOF82937.1 rep protein [Cressdnaviricota sp.] diamond 168 67.4 1 Viruses   Shotokuvirae Cressdnaviricota         Cressdnaviricota sp.
27713221 27713221 PRJNA638724_P_NODE_7124_length_245_cov_1.918605_g7038_i0 PRJNA638724 7124 245 1.918605 4.70058225 wugcerasp narna-like virus 1 3116852 Viruses Viruses 118 8.83e-30   NR WVD52812.1 3116852 g7038 i0 68 0.918367346938776 75 24 91.8 0 235 11 266 340 WVD52812.1 RdRp [wugcerasp narna-like virus 1] diamond 225 118 1 Viruses   Orthornavirae Lenarviricota         wugcerasp narna-like virus 1
28546471 28546471 PRJNA638724_P_NODE_827_length_607_cov_1.355805_g744_i0 PRJNA638724 827 607 1.355805 8.22973635 Bicehmovirus 2842550 Viruses Viruses 199 2.2099999999999997e-56   NR YP_010771007.1 2786677 g744 i0 50 2.02141680395387 204 97 98.8 2 603 4 30 232 YP_010771007.1 RNA-directed RNA polymerase [ssRNA phage SRR7976310_15] diamond 1227 201 0.990049751243781 Viruses   Orthornavirae Lenarviricota Leviviricetes Timlovirales Steitzviridae Bicehmovirus Bicehmovirus limihabitans
28880942 28880942 PRJNA638724_P_NODE_7488_length_241_cov_1.732143_g7402_i0 PRJNA638724 7488 241 1.732143 4.17446463 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 135 6.28e-35   NR WXH59495.1 3003959 g7402 i0 88.2 1.86721991701245 76 9 94.6 0 230 3 130 205 WXH59495.1 capsid protein [Picornavirales sp.] diamond 450 135 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
28944509 28944509 PRJNA638724_P_NODE_1028_length_557_cov_4.150826_g943_i0 PRJNA638724 1028 557 4.150826 23.12010082 Broome luteo-like virus 1 2755148 Viruses Viruses 62.8 8.48e-8   NR WVL03168.1 2755148 g943 i0 33 0.570915619389587 106 46 56.6 2 319 5 55 136 WVL03168.1 RdRp [Broome luteo-like virus 1] diamond 318 62.8 1 Viruses               Broome luteo-like virus 1
29606885 29606885 PRJNA638724_P_NODE_1790_length_441_cov_2.195652_g1704_i0 PRJNA638724 1790 441 2.195652 9.68282532 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 269 3.24e-82   NR WXH59495.1 3003959 g1704 i0 96.5 0.972789115646258 143 5 97.3 0 12 440 548 690 WXH59495.1 capsid protein [Picornavirales sp.] diamond 429 269 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
29638466 29638466 PRJNA638724_P_NODE_5330_length_277_cov_1.553922_g5244_i0 PRJNA638724 5330 277 1.553922 4.30436394 Solemoviridae sp. 2715208 Viruses Viruses 79 1.01e-14   NR QYV43073.1 2715208 g5244 i0 52.9 1.50541516245487 70 32 75.8 1 10 219 223 291 QYV43073.1 MAG: capsid protein [Solemoviridae sp.] diamond 417 79 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Sobelivirales Solemoviridae   Solemoviridae sp.
29638467 29638467 PRJNA638724_P_NODE_6890_length_248_cov_0.880000_g6804_i0 PRJNA638724 6890 248 0.88 2.1824 brine shrimp arlivirus 2 2900377 Viruses Viruses 146 2.8699999999999993e-40   NR UNI74075.1 2900377 g6804 i0 87.2 1.88709677419355 78 10 94.4 0 246 13 106 183 UNI74075.1 MAG: hypothetical protein [brine shrimp arlivirus 2] diamond 468 146 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Lispiviridae Artemvirus Artemvirus bsasecalis
29670028 29670028 PRJNA638724_P_NODE_4150_length_307_cov_3.166667_g4064_i0 PRJNA638724 4150 307 3.166667 9.72166769 Virus sp. 2202649 Viruses Viruses 108 7.18e-26   NR QVG74730.1 2202649 g4064 i0 56 0.889250814332248 91 40 88.9 0 290 18 1 91 QVG74730.1 hypothetical protein 1 [Virus sp.] diamond 273 108 1 Viruses               Virus sp.
29859819 29859819 PRJNA638724_P_NODE_6051_length_261_cov_1.372340_g5965_i0 PRJNA638724 6051 261 1.37234 3.5818074 Macrobrachium rosenbergii picorna-like virus 4 3132542 Viruses Viruses 111 3.93e-26   NR WWZ85593.1 3132542 g5965 i0 61.7 0.931034482758621 81 31 93.1 0 249 7 2741 2821 WWZ85593.1 RNA-dependent RNA polymerase [Macrobrachium rosenbergii picorna-like virus 4] diamond 243 111 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Macrobrachium rosenbergii picorna-like virus 4
29954667 29954667 PRJNA638724_P_NODE_6431_length_254_cov_2.751381_g6345_i0 PRJNA638724 6431 254 2.751381 6.98850774 Ripavirk virus 3130170 Viruses Viruses 96.7 4.540000000000001e-21   NR WZH59214.1 3130170 g6345 i0 56.6 2.96456692913386 83 36 98 0 5 253 378 460 WZH59214.1 MAG: RNA-dependent RNA polymerase [Ripavirk virus] diamond 753 96.7 1 Viruses   Orthornavirae Lenarviricota Leviviricetes       Ripavirk virus
30997345 30997345 PRJNA638724_P_NODE_954_length_572_cov_1.635271_g870_i0 PRJNA638724 954 572 1.635271 9.35375012 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 358 2.55e-115   NR WXH59495.1 3003959 g870 i0 92 0.980769230769231 187 15 98.1 0 12 572 693 879 WXH59495.1 capsid protein [Picornavirales sp.] diamond 561 358 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
31123270 31123270 PRJNA638724_P_NODE_5155_length_281_cov_1.331731_g5069_i0 PRJNA638724 5155 281 1.331731 3.74216411 Permutotetraviridae sp. 2585115 Viruses Viruses 43.1 0.0413   NR WWV86538.1 2585115 g5069 i0 36.6 0.758007117437722 71 43 75.8 1 253 41 328 396 WWV86538.1 MAG: putative capsid protein, partial [Permutotetraviridae sp.] diamond 213 43.1 1 Viruses   Orthornavirae       Permutotetraviridae   Permutotetraviridae sp.
31945785 31945785 PRJNA638724_P_NODE_3637_length_326_cov_1.213439_g3551_i0 PRJNA638724 3637 326 1.213439 3.95581114 Wigfec virus K19_346 2986007 Viruses Viruses 115 9.48e-29   NR UYD39114.1 2986007 g3551 i0 64.4 3.25766871165644 90 32 82.8 0 56 325 54 143 UYD39114.1 MAG: capsid protein [Wigfec virus K19_346] diamond 1062 115 1 Viruses   Shotokuvirae Cressdnaviricota         Wigfec virus K19_346
32830666 32830666 PRJNA638724_P_NODE_3320_length_338_cov_2.833962_g3234_i0 PRJNA638724 3320 338 2.833962 9.57879156 Ripanun virus 3129993 Viruses Viruses 91.3 6.63e-19   NR WZH59076.1 3129993 g3234 i0 44.3 1.89940828402367 106 56 94.1 1 19 336 241 343 WZH59076.1 MAG: maturation protein [Ripanun virus] diamond 642 91.3 1 Viruses   Orthornavirae Lenarviricota Leviviricetes       Ripanun virus
32842919 32842919 PRJNA638724_P_NODE_4260_length_304_cov_2.012987_g4174_i0 PRJNA638724 4260 304 2.012987 6.11948048 Viruses 10239 Viruses Viruses 157 8.15e-44   NR QVG74731.1 2202649 g4174 i0 69.5 2.84210526315789 95 29 93.8 0 286 2 154 248 QVG74731.1 RNA-dependent RNA polymerase [Virus sp.] diamond 864 157 1 Viruses               Virus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;