RNAquarium Metadata Server
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contig_metadata

11 rows where bioproject = "PRJNA638724" and tax_phylum = "Pisuviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 11 ✖

tax_kingdom 1

bioproject 1

  • PRJNA638724 · 11 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5713213 5713213 PRJNA638724_P_NODE_3065_length_350_cov_3.043321_g2979_i0 PRJNA638724 3065 350 3.043321 10.6516235 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 298 3.85e-76   NTclustered gi|2701272534|gb|OR640980.1| 3003959 g2979 i0 82.883 0.951428571428571 333 55 95 2 1 332 2981 2650 Picornavirales sp. isolate Tuebingen RdRp (ORF1) and capsid protein (ORF2) genes, complete cds blastn 333 298 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
5713217 5713217 PRJNA638724_P_NODE_5325_length_277_cov_1.955882_g5239_i0 PRJNA638724 5325 277 1.955882 5.41779314 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 255 1.81e-63   NTclustered gi|2701272534|gb|OR640980.1| 3003959 g5239 i0 83.895 0.963898916967509 267 43 96 0 1 267 2116 1850 Picornavirales sp. isolate Tuebingen RdRp (ORF1) and capsid protein (ORF2) genes, complete cds blastn 267 255 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
8262829 8262829 PRJNA638724_P_NODE_3627_length_326_cov_2.399209_g3541_i0 PRJNA638724 3627 326 2.399209 7.82142134 brine shrimp partiti-like virus 4 2900391 Viruses Viruses 580 3.1599999999999993e-161   NTclustered gi|2209094893|gb|OL472518.1| 2900391 g3541 i0 99.685 12.659509202454 317 1 97 0 1 317 485 169 MAG: Brine shrimp partiti-like virus 4 isolate GSL/14 RNA-dependent RNA polymerase gene, complete cds blastn 4127 580 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   brine shrimp partiti-like virus 4
12088992 12088992 PRJNA638724_P_NODE_6090_length_260_cov_1.957219_g6004_i0 PRJNA638724 6090 260 1.957219 5.0887694 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 311 3.54e-80   NTclustered gi|2701272534|gb|OR640980.1| 3003959 g6004 i0 89.157 0.957692307692308 249 27 96 0 11 259 1142 1390 Picornavirales sp. isolate Tuebingen RdRp (ORF1) and capsid protein (ORF2) genes, complete cds blastn 249 311 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
19736323 19736323 PRJNA638724_P_NODE_5996_length_262_cov_1.227513_g5910_i0 PRJNA638724 5996 262 1.227513 3.21608406 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 226 1.3299999999999994e-54   NTclustered gi|2701272534|gb|OR640980.1| 3003959 g5910 i0 83.004 0.965648854961832 253 39 96 3 2 253 5041 4792 Picornavirales sp. isolate Tuebingen RdRp (ORF1) and capsid protein (ORF2) genes, complete cds blastn 253 226 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
26922846 26922846 PRJNA638724_P_NODE_6682_length_250_cov_2.062147_g6596_i0 PRJNA638724 6682 250 2.062147 5.1553675 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 156 5.329999999999998e-42   NR WXH59494.1 3003959 g6596 i0 93.7 0.948 79 5 94.8 0 238 2 847 925 WXH59494.1 RdRp [Picornavirales sp.] diamond 237 156 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
28880942 28880942 PRJNA638724_P_NODE_7488_length_241_cov_1.732143_g7402_i0 PRJNA638724 7488 241 1.732143 4.17446463 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 135 6.28e-35   NR WXH59495.1 3003959 g7402 i0 88.2 1.86721991701245 76 9 94.6 0 230 3 130 205 WXH59495.1 capsid protein [Picornavirales sp.] diamond 450 135 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
29606885 29606885 PRJNA638724_P_NODE_1790_length_441_cov_2.195652_g1704_i0 PRJNA638724 1790 441 2.195652 9.68282532 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 269 3.24e-82   NR WXH59495.1 3003959 g1704 i0 96.5 0.972789115646258 143 5 97.3 0 12 440 548 690 WXH59495.1 capsid protein [Picornavirales sp.] diamond 429 269 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
29638466 29638466 PRJNA638724_P_NODE_5330_length_277_cov_1.553922_g5244_i0 PRJNA638724 5330 277 1.553922 4.30436394 Solemoviridae sp. 2715208 Viruses Viruses 79 1.01e-14   NR QYV43073.1 2715208 g5244 i0 52.9 1.50541516245487 70 32 75.8 1 10 219 223 291 QYV43073.1 MAG: capsid protein [Solemoviridae sp.] diamond 417 79 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Sobelivirales Solemoviridae   Solemoviridae sp.
29859819 29859819 PRJNA638724_P_NODE_6051_length_261_cov_1.372340_g5965_i0 PRJNA638724 6051 261 1.37234 3.5818074 Macrobrachium rosenbergii picorna-like virus 4 3132542 Viruses Viruses 111 3.93e-26   NR WWZ85593.1 3132542 g5965 i0 61.7 0.931034482758621 81 31 93.1 0 249 7 2741 2821 WWZ85593.1 RNA-dependent RNA polymerase [Macrobrachium rosenbergii picorna-like virus 4] diamond 243 111 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Macrobrachium rosenbergii picorna-like virus 4
30997345 30997345 PRJNA638724_P_NODE_954_length_572_cov_1.635271_g870_i0 PRJNA638724 954 572 1.635271 9.35375012 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 358 2.55e-115   NR WXH59495.1 3003959 g870 i0 92 0.980769230769231 187 15 98.1 0 12 572 693 879 WXH59495.1 capsid protein [Picornavirales sp.] diamond 561 358 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;