contig_metadata
54 rows where bioproject = "PRJNA638724" and tax_phylum = "Actinomycetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 609557 | 609557 | PRJNA638724_P_NODE_6041_length_261_cov_1.574468_g5955_i0 | PRJNA638724 | 6041 | 261 | 1.574468 | 4.10936148 | Corynebacterium suedekumii | 3049801 | Bacteria | Bacteria | 440 | 4.3499999999999984e-119 | NTclustered | gi|2516282625|gb|CP126970.1| | 3049801 | g5955 | i0 | 98.406 | 264.425287356322 | 251 | 3 | 96 | 1 | 1 | 251 | 265031 | 265280 | Corynebacterium suedekumii strain LM112 chromosome, complete genome | blastn | 69015 | 440 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium suedekumii | ||
| 609558 | 609558 | PRJNA638724_P_NODE_6521_length_253_cov_1.133333_g6435_i0 | PRJNA638724 | 6521 | 253 | 1.133333 | 2.86733249 | Mycobacterium paraseoulense | 590652 | Bacteria | Bacteria | 54.7 | 0.006 | NTclustered | gi|1806479221|dbj|AP022619.1| | 590652 | g6435 | i0 | 92.308 | 0.154150197628458 | 39 | 1 | 15 | 2 | 170 | 206 | 5836192 | 5836154 | Mycobacterium paraseoulense JCM 16952 DNA, nearly complete genome | blastn | 39 | 54.7 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycobacterium | Mycobacterium paraseoulense | ||
| 1885764 | 1885764 | PRJNA638724_P_NODE_3922_length_315_cov_1.727273_g3836_i0 | PRJNA638724 | 3922 | 315 | 1.727273 | 5.44090995 | Dietzia sp. B32 | 2915130 | Bacteria | Bacteria | 562 | 1.1e-155 | NTclustered | gi|2288396838|gb|CP093845.1| | 2915130 | g3836 | i0 | 100 | 261.434920634921 | 304 | 0 | 97 | 0 | 11 | 314 | 77683 | 77986 | Dietzia sp. B32 chromosome | blastn | 82352 | 562 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Dietziaceae | Dietzia | Dietzia sp. B32 | ||
| 1885767 | 1885767 | PRJNA638724_P_NODE_6582_length_251_cov_6.668539_g6496_i0 | PRJNA638724 | 6582 | 251 | 6.668539 | 16.73803289 | Corynebacterium matruchotii | 43768 | Bacteria | Bacteria | 435 | 1.93e-117 | NTclustered | gi|1540233514|emb|LR134504.1| | 43768 | g6496 | i0 | 99.174 | 390.498007968127 | 242 | 0 | 96 | 2 | 11 | 251 | 520829 | 520589 | Corynebacterium matruchotii strain NCTC10206 genome assembly, chromosome: 1 | blastn | 98015 | 435 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium matruchotii | ||
| 2430520 | 2430520 | PRJNA638724_P_NODE_3982_length_313_cov_1.650000_g3896_i0 | PRJNA638724 | 3982 | 313 | 1.65 | 5.1645 | Corynebacterium | 1716 | Bacteria | Bacteria | 560 | 3.93e-155 | NTclustered | gi|1710407388|gb|CP038157.1| | 2594913 | g3896 | i0 | 100 | 445.054313099042 | 303 | 0 | 97 | 0 | 11 | 313 | 914557 | 914859 | Corynebacterium sanguinis strain CCUG 58655 chromosome, complete genome | blastn | 139302 | 560 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium sanguinis | ||
| 2430526 | 2430526 | PRJNA638724_P_NODE_6982_length_247_cov_0.885057_g6896_i0 | PRJNA638724 | 6982 | 247 | 0.885057 | 2.18609079 | Cutibacterium | 1912216 | Bacteria | Bacteria | 435 | 1.9e-117 | NTclustered | gi|966542502|gb|CP012354.1| | 1747 | g6896 | i0 | 99.58 | 49.4251012145749 | 238 | 1 | 96 | 0 | 1 | 238 | 2232450 | 2232213 | Cutibacterium acnes strain PA_12_1_L1 chromosome, complete genome | blastn | 12208 | 435 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 2430532 | 2430532 | PRJNA638724_P_NODE_82_length_1536_cov_7.189337_g58_i0 | PRJNA638724 | 82 | 1536 | 7.189337 | 110.42821632 | Mycobacteroides | 670516 | Bacteria | Bacteria | 2209 | 0 | NTclustered | gi|1014174528|gb|CP014954.1| | 36809 | g58 | i0 | 92.917 | 100.1953125 | 1539 | 77 | 98 | 13 | 11 | 1520 | 1450064 | 1451599 | Mycobacteroides abscessus strain FLAC008 chromosome, complete genome | blastn | 153900 | 2209 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycobacteroides | Mycobacteroides abscessus | ||
| 3160541 | 3160541 | PRJNA638724_P_NODE_3043_length_351_cov_2.798561_g2957_i0 | PRJNA638724 | 3043 | 351 | 2.798561 | 9.82294911 | Corynebacterium matruchotii | 43768 | Bacteria | Bacteria | 595 | 1.22e-165 | NTclustered | gi|1540233514|emb|LR134504.1| | 43768 | g2957 | i0 | 98.24 | 372.997150997151 | 341 | 5 | 97 | 1 | 11 | 351 | 519192 | 518853 | Corynebacterium matruchotii strain NCTC10206 genome assembly, chromosome: 1 | blastn | 130922 | 595 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium matruchotii | ||
| 3706981 | 3706981 | PRJNA638724_P_NODE_3763_length_320_cov_7.878543_g3677_i0 | PRJNA638724 | 3763 | 320 | 7.878543 | 25.2113376 | Nocardioides | 1839 | Bacteria | Bacteria | 568 | 2.4099999999999993e-157 | NTclustered | gi|1784167221|gb|MN826685.1| | 35761 | g3677 | i0 | 99.677 | 110.415625 | 310 | 1 | 97 | 0 | 1 | 310 | 740 | 431 | Nocardioides sp. strain ZJ83 16S ribosomal RNA gene, partial sequence | blastn | 35333 | 573 | 0.991273996509599 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Nocardioidaceae | Nocardioides | Nocardioides sp. | ||
| 3706982 | 3706982 | PRJNA638724_P_NODE_4683_length_292_cov_1.589041_g4597_i0 | PRJNA638724 | 4683 | 292 | 1.589041 | 4.63999972 | Corynebacterium | 1716 | Bacteria | Bacteria | 499 | 8.04e-137 | NTclustered | gi|2240706176|gb|CP091863.1| | 37637 | g4597 | i0 | 97.603 | 135.52397260274 | 292 | 5 | 99 | 2 | 1 | 290 | 717370 | 717079 | Corynebacterium pseudodiphtheriticum strain PC1145 chromosome, complete genome | blastn | 39573 | 499 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium pseudodiphtheriticum | ||
| 4437313 | 4437313 | PRJNA638724_P_NODE_7404_length_242_cov_1.680473_g7318_i0 | PRJNA638724 | 7404 | 242 | 1.680473 | 4.06674466 | Actinomyces sp. HMT897 | 2789424 | Bacteria | Bacteria | 407 | 4.0400000000000005e-109 | NTclustered | gi|1955406639|gb|CP067336.1| | 2789424 | g7318 | i0 | 98.283 | 184.615702479339 | 233 | 3 | 96 | 1 | 1 | 232 | 936813 | 937045 | Actinomyces sp. HMT897 chromosome, complete genome | blastn | 44677 | 407 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Actinomycetales | Actinomycetaceae | Actinomyces | Actinomyces sp. HMT897 | ||
| 4983574 | 4983574 | PRJNA638724_P_NODE_8344_length_212_cov_4.280576_g8258_i0 | PRJNA638724 | 8344 | 212 | 4.280576 | 9.07482112 | Cutibacterium | 1912216 | Bacteria | Bacteria | 374 | 3.5e-99 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g8258 | i0 | 100 | 274.169811320755 | 202 | 0 | 95 | 0 | 11 | 212 | 57801 | 58002 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 58124 | 374 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 5713216 | 5713216 | PRJNA638724_P_NODE_4885_length_287_cov_1.257009_g4799_i0 | PRJNA638724 | 4885 | 287 | 1.257009 | 3.60761583 | Streptomyces sp. NBC_00335 | 2975714 | Bacteria | Bacteria | 52.8 | 0.027 | NTclustered | gi|2659013788|gb|CP108006.1| | 2975714 | g4799 | i0 | 100 | 0.0975609756097561 | 28 | 0 | 10 | 0 | 16 | 43 | 3307103 | 3307130 | Streptomyces sp. NBC_00335 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces sp. NBC_00335 | ||
| 6258973 | 6258973 | PRJNA638724_P_NODE_3505_length_331_cov_1.155039_g3419_i0 | PRJNA638724 | 3505 | 331 | 1.155039 | 3.82317909 | Arachnia | 2801844 | Bacteria | Bacteria | 593 | 4.129999999999999e-165 | NTclustered | gi|1540293261|emb|LR134535.1| | 1750 | g3419 | i0 | 100 | 258.090634441088 | 321 | 0 | 97 | 0 | 1 | 321 | 26522 | 26202 | Pseudopropionibacterium propionicum strain NCTC11666 genome assembly, chromosome: 1 | blastn | 85428 | 593 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Arachnia | Arachnia propionica | ||
| 6258977 | 6258977 | PRJNA638724_P_NODE_7425_length_242_cov_0.911243_g7339_i0 | PRJNA638724 | 7425 | 242 | 0.911243 | 2.20520806 | Corynebacterium | 1716 | Bacteria | Bacteria | 431 | 2.4e-116 | NTclustered | gi|1710407388|gb|CP038157.1| | 2594913 | g7339 | i0 | 100 | 2.04132231404959 | 233 | 0 | 96 | 0 | 1 | 233 | 83139 | 83371 | Corynebacterium sanguinis strain CCUG 58655 chromosome, complete genome | blastn | 494 | 431 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium sanguinis | ||
| 6988107 | 6988107 | PRJNA638724_P_NODE_4286_length_303_cov_2.347826_g4200_i0 | PRJNA638724 | 4286 | 303 | 2.347826 | 7.11391278 | Kocuria palustris | 71999 | Bacteria | Bacteria | 505 | 1.7999999999999995e-138 | NTclustered | gi|923033569|gb|CP012507.1| | 71999 | g4200 | i0 | 97.627 | 304.775577557756 | 295 | 6 | 97 | 1 | 1 | 294 | 501618 | 501324 | Kocuria palustris strain MU14/1, complete genome | blastn | 92347 | 505 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Kocuria | Kocuria palustris | ||
| 6988109 | 6988109 | PRJNA638724_P_NODE_6886_length_248_cov_0.880000_g6800_i0 | PRJNA638724 | 6886 | 248 | 0.88 | 2.1824 | Corynebacterium matruchotii | 43768 | Bacteria | Bacteria | 435 | 1.91e-117 | NTclustered | gi|2006291222|gb|CP050134.2| | 43768 | g6800 | i0 | 99.58 | 9.7258064516129 | 238 | 1 | 96 | 0 | 11 | 248 | 1480085 | 1480322 | Corynebacterium matruchotii strain ATCC 14266 chromosome, complete genome | blastn | 2412 | 435 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium matruchotii | ||
| 7533167 | 7533167 | PRJNA638724_P_NODE_3206_length_343_cov_3.285185_g3120_i0 | PRJNA638724 | 3206 | 343 | 3.285185 | 11.26818455 | Cutibacterium | 1912216 | Bacteria | Bacteria | 616 | 9.17e-172 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g3120 | i0 | 100 | 268.008746355685 | 333 | 0 | 97 | 0 | 11 | 343 | 56962 | 57294 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 91927 | 616 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 8808258 | 8808258 | PRJNA638724_P_NODE_587_length_708_cov_3.264567_g507_i0 | PRJNA638724 | 587 | 708 | 3.264567 | 23.11313436 | Brachybacterium | 43668 | Bacteria | Bacteria | 1201 | 0 | NTclustered | gi|2708453573|gb|CP149573.1| | 3023517 | g507 | i0 | 97.714 | 273.329096045198 | 700 | 12 | 99 | 4 | 1 | 698 | 2887439 | 2886742 | Brachybacterium sp. GPGPB12 chromosome, complete genome | blastn | 193517 | 1206 | 0.995854063018242 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Dermabacteraceae | Brachybacterium | Brachybacterium sp. GPGPB12 | ||
| 8808261 | 8808261 | PRJNA638724_P_NODE_7207_length_244_cov_1.923977_g7121_i0 | PRJNA638724 | 7207 | 244 | 1.923977 | 4.69450388 | Cutibacterium | 1912216 | Bacteria | Bacteria | 431 | 2.419999999999999e-116 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g7121 | i0 | 100 | 296.516393442623 | 233 | 0 | 95 | 0 | 2 | 234 | 56111 | 55879 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 72350 | 431 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 9538128 | 9538128 | PRJNA638724_P_NODE_3648_length_325_cov_2.698413_g3562_i0 | PRJNA638724 | 3648 | 325 | 2.698413 | 8.76984225 | Nocardioides marmotae | 2663857 | Bacteria | Bacteria | 523 | 5.379999999999999e-144 | NTclustered | gi|1845906646|gb|CP053660.1| | 2663857 | g3562 | i0 | 97.394 | 233.84 | 307 | 8 | 94 | 0 | 19 | 325 | 2435660 | 2435354 | Nocardioides marmotae strain zg-579 chromosome, complete genome | blastn | 75998 | 523 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Nocardioidaceae | Nocardioides | Nocardioides marmotae | ||
| 10813783 | 10813783 | PRJNA638724_P_NODE_7429_length_242_cov_0.911243_g7343_i0 | PRJNA638724 | 7429 | 242 | 0.911243 | 2.20520806 | Kocuria rhizophila | 72000 | Bacteria | Bacteria | 429 | 8.619999999999998e-116 | NTclustered | gi|2239096029|gb|CP097204.1| | 72000 | g7343 | i0 | 100 | 88.6115702479339 | 232 | 0 | 96 | 0 | 1 | 232 | 619644 | 619413 | Kocuria rhizophila strain Noodlococcus chromosome, complete genome | blastn | 21444 | 429 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Kocuria | Kocuria rhizophila | ||
| 12088987 | 12088987 | PRJNA638724_P_NODE_4090_length_309_cov_1.266949_g4004_i0 | PRJNA638724 | 4090 | 309 | 1.266949 | 3.91487241 | Ornithinimicrobium cryptoxanthini | 2934161 | Bacteria | Bacteria | 351 | 2.54e-92 | NTclustered | gi|2259874943|gb|CP099490.1| | 2934161 | g4004 | i0 | 87.898 | 119.333333333333 | 314 | 19 | 97 | 14 | 1 | 299 | 1317882 | 1317573 | Ornithinimicrobium cryptoxanthini strain JY.X270 chromosome, complete genome | blastn | 36874 | 351 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Ornithinimicrobiaceae | Ornithinimicrobium | Ornithinimicrobium cryptoxanthini | ||
| 12088990 | 12088990 | PRJNA638724_P_NODE_5490_length_273_cov_3.855000_g5404_i0 | PRJNA638724 | 5490 | 273 | 3.855 | 10.52415 | Cutibacterium granulosum | 33011 | Bacteria | Bacteria | 488 | 1.6099999999999996e-133 | NTclustered | gi|2438329814|dbj|AP026710.1| | 33011 | g5404 | i0 | 100 | 256.260073260073 | 264 | 0 | 97 | 0 | 10 | 273 | 485634 | 485897 | Cutibacterium granulosum TP-CG7 DNA, complete genome | blastn | 69959 | 488 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium granulosum | ||
| 13363754 | 13363754 | PRJNA638724_P_NODE_5791_length_266_cov_2.777202_g5705_i0 | PRJNA638724 | 5791 | 266 | 2.777202 | 7.38735732 | Actinomyces oris | 544580 | Bacteria | Bacteria | 475 | 1.2199999999999997e-129 | NTclustered | gi|2430736086|gb|CP116225.1| | 544580 | g5705 | i0 | 99.615 | 204.142857142857 | 260 | 1 | 98 | 0 | 1 | 260 | 357131 | 357390 | Actinomyces oris strain WVU627 plasmid unnamed1, complete sequence | blastn | 54302 | 475 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Actinomycetales | Actinomycetaceae | Actinomyces | Actinomyces oris | ||
| 13909275 | 13909275 | PRJNA638724_P_NODE_251_length_1029_cov_5.492678_g195_i0 | PRJNA638724 | 251 | 1029 | 5.492678 | 56.51965662 | Mycobacteroides | 670516 | Bacteria | Bacteria | 1875 | 0 | NTclustered | gi|1951304461|gb|CP050223.1| | 1774 | g195 | i0 | 99.902 | 98.9319727891156 | 1018 | 1 | 99 | 0 | 2 | 1019 | 1222616 | 1221599 | Mycobacteroides chelonae strain Myco1 chromosome | blastn | 101801 | 1875 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycobacteroides | Mycobacteroides chelonae | ||
| 13909282 | 13909282 | PRJNA638724_P_NODE_6971_length_247_cov_0.885057_g6885_i0 | PRJNA638724 | 6971 | 247 | 0.885057 | 2.18609079 | Cutibacterium | 1912216 | Bacteria | Bacteria | 440 | 4.079999999999999e-119 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g6885 | i0 | 100 | 52.0485829959514 | 238 | 0 | 96 | 0 | 1 | 238 | 1061453 | 1061690 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 12856 | 440 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 13909284 | 13909284 | PRJNA638724_P_NODE_7411_length_242_cov_1.355030_g7325_i0 | PRJNA638724 | 7411 | 242 | 1.35503 | 3.2791726 | Rothia | 32207 | Bacteria | Bacteria | 420 | 5.19e-113 | NTclustered | gi|470475611|ref|NR_076290.1| | 43675 | g7325 | i0 | 99.142 | 208.574380165289 | 233 | 2 | 96 | 0 | 1 | 233 | 541 | 309 | Rothia mucilaginosa strain DY-18 23S ribosomal RNA gene, complete sequence | blastn | 50475 | 420 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Rothia | Rothia mucilaginosa | ||
| 15183797 | 15183797 | PRJNA638724_P_NODE_2672_length_371_cov_3.463087_g2586_i0 | PRJNA638724 | 2672 | 371 | 3.463087 | 12.84805277 | Cutibacterium | 1912216 | Bacteria | Bacteria | 671 | 0 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g2586 | i0 | 100 | 266.935309973046 | 363 | 0 | 98 | 0 | 9 | 371 | 56588 | 56950 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 99033 | 671 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 15183799 | 15183799 | PRJNA638724_P_NODE_592_length_706_cov_3.467615_g215_i1 | PRJNA638724 | 592 | 706 | 3.467615 | 24.4813619 | Nocardioides | 1839 | Bacteria | Bacteria | 1099 | 0 | NTclustered | gi|119534933|gb|CP000509.1| | 196162 | g215 | i1 | 95.035 | 239.50283286119 | 705 | 25 | 99 | 5 | 11 | 706 | 2116013 | 2116716 | Nocardioides sp. JS614, complete genome | blastn | 169089 | 1099 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Nocardioidaceae | Nocardioides | Nocardioides sp. JS614 | ||
| 16458084 | 16458084 | PRJNA638724_P_NODE_6133_length_259_cov_2.327957_g6047_i0 | PRJNA638724 | 6133 | 259 | 2.327957 | 6.02940863 | Nocardioides | 1839 | Bacteria | Bacteria | 460 | 3.3099999999999997e-125 | NTclustered | gi|119534933|gb|CP000509.1| | 196162 | g6047 | i0 | 100 | 230.15444015444 | 249 | 0 | 96 | 0 | 1 | 249 | 2116682 | 2116434 | Nocardioides sp. JS614, complete genome | blastn | 59610 | 460 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Nocardioidaceae | Nocardioides | Nocardioides sp. JS614 | ||
| 16458085 | 16458085 | PRJNA638724_P_NODE_6513_length_253_cov_1.366667_g6427_i0 | PRJNA638724 | 6513 | 253 | 1.366667 | 3.45766751 | Curtobacterium | 2034 | Bacteria | Bacteria | 449 | 6.970000000000001e-122 | NTclustered | gi|703597103|gb|CP009755.1| | 1561023 | g6427 | i0 | 100 | 268.928853754941 | 243 | 0 | 96 | 0 | 11 | 253 | 1226899 | 1227141 | Curtobacterium sp. MR_MD2014, complete genome | blastn | 68039 | 449 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Curtobacterium | Curtobacterium sp. MR_MD2014 | ||
| 18461681 | 18461681 | PRJNA638724_P_NODE_3615_length_327_cov_1.645669_g3529_i0 | PRJNA638724 | 3615 | 327 | 1.645669 | 5.38133763 | Actinomyces sp. oral taxon 414 | 712122 | Bacteria | Bacteria | 580 | 3.1699999999999993e-161 | NTclustered | gi|925194983|gb|CP012590.1| | 712122 | g3529 | i0 | 99.685 | 236.755351681957 | 317 | 1 | 97 | 0 | 1 | 317 | 2803894 | 2804210 | Actinomyces sp. oral taxon 414 strain F0588, complete genome | blastn | 77419 | 580 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Actinomycetales | Actinomycetaceae | Actinomyces | Actinomyces sp. oral taxon 414 | ||
| 19006842 | 19006842 | PRJNA638724_P_NODE_275_length_989_cov_5.068777_g215_i0 | PRJNA638724 | 275 | 989 | 5.068777 | 50.13020453 | Micrococcus | 1269 | Bacteria | Bacteria | 1382 | 0 | NTclustered | gi|2276865348|gb|CP101528.1| | 1270 | g215 | i0 | 92.316 | 236.50353892821 | 976 | 70 | 98 | 4 | 7 | 979 | 1627305 | 1628278 | Micrococcus luteus strain ML chromosome, complete genome | blastn | 233902 | 1382 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Micrococcus | Micrococcus luteus | ||
| 19006846 | 19006846 | PRJNA638724_P_NODE_7855_length_233_cov_3.306250_g7769_i0 | PRJNA638724 | 7855 | 233 | 3.30625 | 7.7035625 | Kocuria | 57493 | Bacteria | Bacteria | 414 | 2.3099999999999998e-111 | NTclustered | gi|923033569|gb|CP012507.1| | 71999 | g7769 | i0 | 100 | 333.497854077253 | 224 | 0 | 96 | 0 | 10 | 233 | 220000 | 220223 | Kocuria palustris strain MU14/1, complete genome | blastn | 77705 | 414 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Kocuria | Kocuria palustris | ||
| 20281749 | 20281749 | PRJNA638724_P_NODE_2016_length_419_cov_1.554913_g1930_i0 | PRJNA638724 | 2016 | 419 | 1.554913 | 6.51508547 | Actinomyces | 1654 | Bacteria | Bacteria | 737 | 0 | NTclustered | gi|1359141068|gb|CP027236.1| | 2081702 | g1930 | i0 | 98.341 | 251.007159904535 | 422 | 4 | 100 | 1 | 1 | 419 | 582258 | 581837 | Actinomyces sp. oral taxon 897 strain F0631 chromosome, complete genome | blastn | 105172 | 737 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Actinomycetales | Actinomycetaceae | Actinomyces | Actinomyces sp. oral taxon 897 | ||
| 20281756 | 20281756 | PRJNA638724_P_NODE_8276_length_216_cov_5.160839_g8190_i0 | PRJNA638724 | 8276 | 216 | 5.160839 | 11.14741224 | Actinomyces | 1654 | Bacteria | Bacteria | 381 | 2.139999999999999e-101 | NTclustered | gi|1841505946|gb|MT463492.1| | 1655 | g8190 | i0 | 100 | 97.2777777777778 | 206 | 0 | 95 | 0 | 1 | 206 | 1384 | 1179 | Actinomyces naeslundii strain KCOM 3252 (=JS358) 16S ribosomal RNA gene, partial sequence | blastn | 21012 | 381 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Actinomycetales | Actinomycetaceae | Actinomyces | Actinomyces naeslundii | ||
| 21011985 | 21011985 | PRJNA638724_P_NODE_4817_length_288_cov_4.618605_g4731_i0 | PRJNA638724 | 4817 | 288 | 4.618605 | 13.3015824 | Micrococcus porci | 2856555 | Bacteria | Bacteria | 508 | 1.32e-139 | NTclustered | gi|2099415156|gb|CP083691.1| | 2856555 | g4731 | i0 | 99.64 | 321.305555555556 | 278 | 1 | 97 | 0 | 1 | 278 | 1443313 | 1443036 | Micrococcus porci strain KD337-16 chromosome, complete genome | blastn | 92536 | 508 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Micrococcus | Micrococcus porci | ||
| 21011987 | 21011987 | PRJNA638724_P_NODE_6637_length_251_cov_0.865169_g6551_i0 | PRJNA638724 | 6637 | 251 | 0.865169 | 2.17157419 | Dietzia psychralcaliphila | 139021 | Bacteria | Bacteria | 87.9 | 6.24e-13 | NTclustered | gi|1387115530|gb|CP015453.1| | 139021 | g6551 | i0 | 92.063 | 0.378486055776892 | 63 | 4 | 25 | 1 | 189 | 251 | 1737051 | 1737112 | Dietzia psychralcaliphila strain ILA-1 chromosome, complete genome | blastn | 95 | 87.9 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Dietziaceae | Dietzia | Dietzia psychralcaliphila | ||
| 21557234 | 21557234 | PRJNA638724_P_NODE_4197_length_306_cov_1.811159_g4111_i0 | PRJNA638724 | 4197 | 306 | 1.811159 | 5.54214654 | Arachnia | 2801844 | Bacteria | Bacteria | 542 | 1.39e-149 | NTclustered | gi|1540109112|emb|LR134406.1| | 1750 | g4111 | i0 | 99.662 | 204.088235294118 | 296 | 1 | 97 | 0 | 11 | 306 | 32335 | 32630 | Pseudopropionibacterium propionicum strain NCTC12967 genome assembly, chromosome: 1 | blastn | 62451 | 542 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Arachnia | Arachnia propionica | ||
| 22832745 | 22832745 | PRJNA638724_P_NODE_5918_length_263_cov_3.210526_g5832_i0 | PRJNA638724 | 5918 | 263 | 3.210526 | 8.44368338 | Microbacterium | 33882 | Bacteria | Bacteria | 381 | 2.7e-101 | NTclustered | gi|470475773|ref|NR_076300.1| | 2033 | g5832 | i0 | 100 | 143.228136882129 | 206 | 0 | 78 | 0 | 10 | 215 | 1326 | 1531 | Microbacterium testaceum strain StLB037 23S ribosomal RNA gene, complete sequence | blastn | 37669 | 383 | 0.994778067885117 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Microbacterium | Microbacterium testaceum | ||
| 23562200 | 23562200 | PRJNA638724_P_NODE_1539_length_470_cov_4.382872_g1453_i0 | PRJNA638724 | 1539 | 470 | 4.382872 | 20.5994984 | Corynebacterium matruchotii | 43768 | Bacteria | Bacteria | 833 | 0 | NTclustered | gi|2006291222|gb|CP050134.2| | 43768 | g1453 | i0 | 99.349 | 467.553191489362 | 461 | 2 | 98 | 1 | 11 | 470 | 453403 | 453863 | Corynebacterium matruchotii strain ATCC 14266 chromosome, complete genome | blastn | 219750 | 833 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium matruchotii | ||
| 23562209 | 23562209 | PRJNA638724_P_NODE_8059_length_228_cov_3.258065_g7973_i0 | PRJNA638724 | 8059 | 228 | 3.258065 | 7.4283882 | Brachybacterium sp. GU-2 | 3069708 | Bacteria | Bacteria | 403 | 4.87e-108 | NTclustered | gi|2583613703|gb|CP133037.2| | 3069708 | g7973 | i0 | 100 | 337.842105263158 | 218 | 0 | 96 | 0 | 1 | 218 | 715223 | 715440 | Brachybacterium sp. GU-2 chromosome, complete genome | blastn | 77028 | 403 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Dermabacteraceae | Brachybacterium | Brachybacterium sp. GU-2 | ||
| 24107262 | 24107262 | PRJNA638724_P_NODE_4399_length_300_cov_1.154185_g4313_i0 | PRJNA638724 | 4399 | 300 | 1.154185 | 3.462555 | Brachybacterium | 43668 | Bacteria | Bacteria | 520 | 6.36e-143 | NTclustered | gi|2206936375|gb|OM971492.1| | 173364 | g4313 | i0 | 98.966 | 102.326666666667 | 290 | 3 | 97 | 0 | 1 | 290 | 294 | 5 | Brachybacterium sacelli strain CS0G2LA439 16S ribosomal RNA gene, partial sequence | blastn | 30698 | 525 | 0.990476190476191 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Dermabacteraceae | Brachybacterium | Brachybacterium sacelli | ||
| 24107265 | 24107265 | PRJNA638724_P_NODE_5399_length_275_cov_2.584158_g5313_i0 | PRJNA638724 | 5399 | 275 | 2.584158 | 7.1064345 | Propionibacteriaceae | 31957 | Bacteria | Bacteria | 429 | 9.989999999999999e-116 | NTclustered | gi|1774232673|gb|CP045725.1| | 2662261 | g5313 | i0 | 95.849 | 384.410909090909 | 265 | 11 | 96 | 0 | 1 | 265 | 287245 | 287509 | Raineyella fluvialis strain CBA3103 chromosome, complete genome | blastn | 105713 | 429 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Raineyella | Raineyella fluvialis | ||
| 24107267 | 24107267 | PRJNA638724_P_NODE_5899_length_264_cov_1.015707_g5813_i0 | PRJNA638724 | 5899 | 264 | 1.015707 | 2.68146648 | Micrococcus | 1269 | Bacteria | Bacteria | 398 | 2.6899999999999994e-106 | NTclustered | gi|1891023613|gb|CP058971.1| | 1270 | g5813 | i0 | 95.219 | 270.162878787879 | 251 | 12 | 96 | 0 | 4 | 254 | 346064 | 345814 | Micrococcus luteus strain V017 chromosome, complete genome | blastn | 71323 | 398 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Micrococcus | Micrococcus luteus | ||
| 24107268 | 24107268 | PRJNA638724_P_NODE_6019_length_261_cov_3.186170_g5933_i0 | PRJNA638724 | 6019 | 261 | 3.18617 | 8.3159037 | Micrococcus | 1269 | Bacteria | Bacteria | 477 | 3.3099999999999986e-130 | NTclustered | gi|1949953231|gb|CP066288.1| | 1270 | g5933 | i0 | 100 | 241.743295019157 | 258 | 0 | 99 | 0 | 1 | 258 | 2260414 | 2260671 | Micrococcus luteus strain FDAARGOS_1034 chromosome | blastn | 63095 | 477 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Micrococcus | Micrococcus luteus | ||
| 24107269 | 24107269 | PRJNA638724_P_NODE_7519_length_241_cov_0.916667_g7433_i0 | PRJNA638724 | 7519 | 241 | 0.916667 | 2.20916747 | Cutibacterium | 1912216 | Bacteria | Bacteria | 429 | 8.58e-116 | NTclustered | gi|966542502|gb|CP012354.1| | 1747 | g7433 | i0 | 100 | 52.8921161825726 | 232 | 0 | 96 | 0 | 1 | 232 | 975966 | 976197 | Cutibacterium acnes strain PA_12_1_L1 chromosome, complete genome | blastn | 12747 | 429 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 25381693 | 25381693 | PRJNA638724_P_NODE_2660_length_372_cov_2.685619_g2574_i0 | PRJNA638724 | 2660 | 372 | 2.685619 | 9.99050268 | Actinomyces | 1654 | Bacteria | Bacteria | 608 | 1.6699999999999992e-169 | NTclustered | gi|1948661326|gb|CP066049.1| | 1655 | g2574 | i0 | 96.961 | 237.991935483871 | 362 | 11 | 97 | 0 | 1 | 362 | 296497 | 296858 | Actinomyces naeslundii strain FDAARGOS_1037 chromosome, complete genome | blastn | 88533 | 608 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Actinomycetales | Actinomycetaceae | Actinomyces | Actinomyces naeslundii | ||
| 26985990 | 26985990 | PRJNA638724_P_NODE_6882_length_248_cov_0.880000_g6796_i0 | PRJNA638724 | 6882 | 248 | 0.88 | 2.1824 | Corynebacterium urealyticum | 43771 | Bacteria | Bacteria | 50.4 | 7.24e-5 | NR | WP_148813241.1 | 43771 | g6796 | i0 | 45.3 | 0.774193548387097 | 64 | 35 | 77.4 | 0 | 196 | 5 | 73 | 136 | WP_148813241.1 C40 family peptidase [Corynebacterium urealyticum] | diamond | 192 | 50.4 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium urealyticum | ||
| 29386375 | 29386375 | PRJNA638724_P_NODE_5689_length_269_cov_1.295918_g5603_i0 | PRJNA638724 | 5689 | 269 | 1.295918 | 3.48601942 | Acidimicrobiia bacterium | 2080302 | Bacteria | Bacteria | 43.1 | 0.0379 | NR | HEY4607379.1 | 2080302 | g5603 | i0 | 30.6 | 0.947955390334573 | 85 | 49 | 94.8 | 2 | 262 | 8 | 711 | 785 | HEY4607379.1 DUF655 domain-containing protein [Acidimicrobiia bacterium] | diamond | 255 | 43.1 | 1 | Bacteria | Bacillati | Actinomycetota | Acidimicrobiia | Acidimicrobiia bacterium | |||||
| 31914326 | 31914326 | PRJNA638724_P_NODE_6377_length_255_cov_2.120879_g6291_i0 | PRJNA638724 | 6377 | 255 | 2.120879 | 5.40824145 | Pseudonocardia sp. N23 | 1987376 | Bacteria | Bacteria | 42.7 | 0.0449 | NR | WP_098957286.1 | 1987376 | g6291 | i0 | 33.3 | 0.811764705882353 | 69 | 40 | 81.2 | 2 | 240 | 34 | 811 | 873 | WP_098957286.1 phosphoenolpyruvate carboxylase [Pseudonocardia sp. N23] | diamond | 207 | 42.7 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Pseudonocardiales | Pseudonocardiaceae | Pseudonocardia | Pseudonocardia sp. N23 | ||
| 32072530 | 32072530 | PRJNA638724_P_NODE_7498_length_241_cov_1.386905_g7412_i0 | PRJNA638724 | 7498 | 241 | 1.386905 | 3.34244105 | Ilumatobacter sp. | 1967498 | Bacteria | Bacteria | 43.1 | 0.0251 | NR | NKB41104.1 | 1967498 | g7412 | i0 | 34.4 | 0.759336099585062 | 61 | 38 | 73.4 | 1 | 44 | 220 | 11 | 71 | NKB41104.1 hypothetical protein [Ilumatobacter sp.] | diamond | 183 | 43.1 | 1 | Bacteria | Bacillati | Actinomycetota | Acidimicrobiia | Acidimicrobiales | Ilumatobacteraceae | Ilumatobacter | Ilumatobacter sp. | ||
| 32830667 | 32830667 | PRJNA638724_P_NODE_6640_length_251_cov_0.865169_g6554_i0 | PRJNA638724 | 6640 | 251 | 0.865169 | 2.17157419 | Streptomyces mirabilis | 68239 | Bacteria | Bacteria | 40.8 | 0.0423 | NR | WP_256259314.1 | 68239 | g6554 | i0 | 36.3 | 0.956175298804781 | 80 | 43 | 87.3 | 4 | 247 | 29 | 5 | 83 | WP_256259314.1 hypothetical protein [Streptomyces mirabilis] | diamond | 240 | 40.8 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces mirabilis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;